Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3113 |
Symbol | |
ID | 4597898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3315098 |
End bp | 3316900 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639777719 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_924302 |
Protein GI | 119717337 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGTGAGT TCTCCAACCC GCTGACGATC GAGGTCCCCG CGACCGGCAA CCTCACCGAC GACGTGGTGG TCAACGCCCG CGAGGCCGGG GGGAGCATCG TGTTCAGCCG GCCCTCGGCG CACCCGGACG CCGCGGGCTG GGAGGACGTC ACCGCCGCAC AGTTCCTCGC CGAGGTGAGC GGCGTCGCCA AGGGGCTGAT CGCCGCAGGC ATCGAGGCCG GCGACCGGGT CGCCGTGATC TCCAAGACCC GCTACGAGTG GACCCTCCTC GACTACGCGG CCTGGTTCGC GGGTGCGGTC ACCGTGCCGA TCTACGAGAC CTCCTCGGCC GAGCAGATCG CCTGGATCCT CGCCGACTCC GGCGCCCGCG CGGTCGTCGC CGAGGGCGCC GACCACCTGG CCCGCATCCG GGAGGTCCGG TCCGGGCTCG ACCAGCTCAA CCACGTCTGG TCGATCGCCG ACAACGCCGT CGACAACCTG GTGCGGCTCG GCGCGGACAT CTCCGACGAG GAGCTGGAGA AGCGGCGTAC GACGGCGACC CCGCTCGACC TGGCCACCCT GATCTACACC TCCGGCACGA CCGGTCGACC CAAGGGCTGC ATGCTCACCC ACGGCAACTT CATGTTCGAG CTGAGCGTCG CCGTCGCCGA GCTGCCCGAG CTGTTCGAGG GCGACGACTC GTCCACGCTG CTGTTCCTGC CGCTCGCGCA CGTGTTCGCC CGGATCATCC AGGTCGGCTG CATCAAGACC CGCACCCGGC TCGGTCACAG CTCCGACATC AAGAACCTGC TCGCGGACCT GCAGGAGTTC AAGCCGACGT TCATCCTGGC GGTGCCGCGG GTCTTCGAGA AGGTCTTCAA CACCGCCTCC CAGAAGGCCA CGGCCGACGG ACGCGGCCGG ATCTTCGACA GGGCCGCGGA GACCGCGATC GCCTACTCGC GCGGGCTCGA CCGGGGCCGG CCCTCGCTCG CCGTGCGCGC GAAGCACGCC GTGTTCCGCC GCCTGGTCTA CGGGAAGCTG CTCGCCGCGC TCGGTGGCAG CTGCCGGTAC GCCGTCTCGG GCGGTGCGCC GCTCGGTGAC CGGCTCGGCC ACTTCTACCG CGGCATCGGG CTGACCGTGC TGGAGGGCTA CGGGCTCACC GAGACGACGG CCGCGCTGAC GGTCAACCTC CCGGACGCGA TCAAGGTCGG CACCGTGGGC CGGCCGCTGC CGGGCACCGC CGTACGCGTC GCCGACGACG GGGAGCTGCT GTTCCGCGGC GGCCAGGTGT TCGCGGGCTA CTGGCACAAC GAGACGGCCA CCAGCGAAGC GTTGGAGCCG GACGCCTGGT TCCACACCGG CGACGTCGGC GAGGTCGACG ACGAGGGGTT CGTGCGGATC ACCGGCCGGA AGAAGGAGAT CCTGGTGACT GCAGGCGGCA AGAACGTCGC GCCCGCCGTG CTCGAGGACC GGCTCCGGGC GCACGTGCTG ATCGACCAGT GCATGGTCGT CGGTGACGGC CAACCGTTCA TCGCCGCGCT GGTCACGATC GACCGCGAGT CCTTCCCCGC CTGGGCCGAG GCGCATGGCA AGTCGGGCAG CATCGCCTCC CTCGTCGACG ACCCGGACCT CCGGGCGGAG ATCGCGGCGG CAGTCGAGGA CGCCAACAAG GCCGTCTCGA AGGCCGAGTC GATCCGGAAG TTCACGATCC TCCCCGACGA GTGGACCGAG GAGGGCGGAC AGCTGACCCC CAGCCTCAAG ATCCGCCGCA ACGTGGTGAT GCGGGAGCTC AAGGACGACG TCGCCGCGCT CTACCTGAGC TGA
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Protein sequence | MREFSNPLTI EVPATGNLTD DVVVNAREAG GSIVFSRPSA HPDAAGWEDV TAAQFLAEVS GVAKGLIAAG IEAGDRVAVI SKTRYEWTLL DYAAWFAGAV TVPIYETSSA EQIAWILADS GARAVVAEGA DHLARIREVR SGLDQLNHVW SIADNAVDNL VRLGADISDE ELEKRRTTAT PLDLATLIYT SGTTGRPKGC MLTHGNFMFE LSVAVAELPE LFEGDDSSTL LFLPLAHVFA RIIQVGCIKT RTRLGHSSDI KNLLADLQEF KPTFILAVPR VFEKVFNTAS QKATADGRGR IFDRAAETAI AYSRGLDRGR PSLAVRAKHA VFRRLVYGKL LAALGGSCRY AVSGGAPLGD RLGHFYRGIG LTVLEGYGLT ETTAALTVNL PDAIKVGTVG RPLPGTAVRV ADDGELLFRG GQVFAGYWHN ETATSEALEP DAWFHTGDVG EVDDEGFVRI TGRKKEILVT AGGKNVAPAV LEDRLRAHVL IDQCMVVGDG QPFIAALVTI DRESFPAWAE AHGKSGSIAS LVDDPDLRAE IAAAVEDANK AVSKAESIRK FTILPDEWTE EGGQLTPSLK IRRNVVMREL KDDVAALYLS
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