Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3107 |
Symbol | |
ID | 4597892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3309587 |
End bp | 3310894 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639777713 |
Product | LOR/SDH bifunctional protein |
Protein accession | YP_924296 |
Protein GI | 119717331 |
COG category | [S] Function unknown |
COG ID | [COG1915] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00300] conserved hypothetical protein TIGR00300 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTGTAG CCGCACCGCC AGCCTCGGCG CCCGACGCGA TCCACCTCGT TATCGTGCAG CCCGTGAGTG CCCACGAGTC GGTAGAGATC ACCGGCCACC TGATGGACCA CGGGATCCTG TCCCGCGTGC TCGACGACAT CCGCGAGTAC GGCGGCGACT ACGCGATCGA GCGCTTCGAC GTGGGTCGGG AGACCGACGA CCCCTCGCAC GCGGTCATCA CCGTGACCGC CGAGGACGGC GAGGCGCTGG AGCGGCTGCT GATGCGGCTG CAGACCCGCG GGGTCAACCA GGTCGACCCG GGCGAGGCGA GCCTCAGCGA GGCCGACCGG GACGGGGTCT TCCCCGACCA CTTCTACTCG ACCACGAACC TCGAGACCCA GGTCCGCCTC GGGGGTGCCT GGCTGCGGGT CGACAACCCG GAGATGGACT GCGGTCTGAT CGTCGAGCGC GGCGCGGACG GACGGCCGGC GCGCGTCCAC ACCCTCCCGA TGTCCGACGT GCGGCGCGGG ATGCTCGTCG TGACCGGCGC GTCCGGCGTC CGGGTCGCGG TGCCCGCGCC CGACCGCACC GCCGGTGCGT TCGGGTTCAT GGAGTCCGAC GTGTCGTCGG AGAAGCCCCA GGCGGTGCTG GTCCGGCAGG TCGCCGACGG CATGCGCGAG GCCAAGGCCG CCGGCAAGCG GGTGCTGTGG GTCGGCGGCC CGGGCGTCGT GCACACCGGC GCCGCACCGG CGATGGTGGC CCTGGTGCAC GCCGGGTACG TCGACGTGCT GTTCGCCGGC AACGCACTCG CCACCCACGA CATCGAGTCC GCGCTCTACG GCACCAGCCT CGGCGTCGAC CTGGCCATGG GACGGGGCGT CGAGCACGGG CACGAGCACC ACATCCGCGC GATCAACACG ATCCGCCGCG AAGGGTCGAT CAAGGCCGCC GTCGAGAGCG GCGTGCTGAC CGGCGGGATC ATGCACGCGA TGGTCACCCA CGACAAGACG TTCGTCCTGG TGGGCTCGGT GCGCGACGAC GGGCCGCTGC CCGACGTCTA CACCGACGTG ATCGAGGGCC AGCGGGCGAT GCGGGCCAAC CTCACCGACG TCGGGTTCTG CCTGATGGTG GCGACCATGC TGCACTCGGT CGCCACCGGG AACATCCTCC CGGCCTCGGT GCCGCTCGTC TGCGTGGACA TCAACCCGGC GACCGTCACC AAGCTGGCCG ATCGCGGGTC CGCGCAGGCC CGTGGCATCG TCACCGACGT CGGGCTGTTC CTCGAGCAGC TCGCCGTCGA GCTCGTGCCC GAGTACCGGC GCTCCTGA
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Protein sequence | MVVAAPPASA PDAIHLVIVQ PVSAHESVEI TGHLMDHGIL SRVLDDIREY GGDYAIERFD VGRETDDPSH AVITVTAEDG EALERLLMRL QTRGVNQVDP GEASLSEADR DGVFPDHFYS TTNLETQVRL GGAWLRVDNP EMDCGLIVER GADGRPARVH TLPMSDVRRG MLVVTGASGV RVAVPAPDRT AGAFGFMESD VSSEKPQAVL VRQVADGMRE AKAAGKRVLW VGGPGVVHTG AAPAMVALVH AGYVDVLFAG NALATHDIES ALYGTSLGVD LAMGRGVEHG HEHHIRAINT IRREGSIKAA VESGVLTGGI MHAMVTHDKT FVLVGSVRDD GPLPDVYTDV IEGQRAMRAN LTDVGFCLMV ATMLHSVATG NILPASVPLV CVDINPATVT KLADRGSAQA RGIVTDVGLF LEQLAVELVP EYRRS
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