Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3096 |
Symbol | |
ID | 4597881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3297862 |
End bp | 3299199 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639777702 |
Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
Protein accession | YP_924285 |
Protein GI | 119717320 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACGA TCCCCGACCT CGCGACCCTG CACGCCATGG GCGCCGCCCA GCAGCCGTCG TACCCCGACC GCGCCGCCGT CGACTCGGCG GTCCAGCGGT TGCGGACGGC CCCGCCGCTG GTGTTCGCCG GCGAGTGCGA CGACCTGAAG GGCAAGATCG CCCAGGTCGC GCGCGGCGAG GCGTTCCTGC TGCAGGGGGG CGACTGCGCC GAGACGTTCG CCGGCGTGAC CGCCGACAAC GTGCGCAACA AGCTGCGGGT GCTGCTGCAG ATGGCGGTCG TGCTGACCTA CGCCGCGTCC GTGCCGGTCG TGAAGGTCGG CCGGATCGCC GGGCAGTACG CCAAGCCGCG CTCCTCGGAC TTCGAGACCC GCGACGGGGT GACGCTGCCG GCCTACCGCG GCGACGCGGT CAACGGCTAC GACTTCACCG CGGAGTCGCG GGTGCCCGAC CCGCAGCGGC TGGTCGACGT CTACAACTCG TCGGCCGCGA CGCTGAACCT GGTGCGCGCG TTCGTGACCG GCGGCTACGC CGACCTGCGC CAGGTGCACA CCTGGAACAC CGACTTCGTG CGGGAGTCGC CGGTCGGCCA GCAGTACGAG GCGATGGCGA ACGAGATCGA GCGCGCGCTG ACCTTCATGC GGGCGATCGG CGCGGACCCC GATGAGTTCC ACCGGGTCGA CTTCCACTCC AGCCACGAGG CGCTGGTCCT GGAGTACGAG CAGGCCCTGA CGCGCATCGA CTCGCGCACG AGCACGCCGT ACGACGTCTC CGGGCACTTC CTCTGGATCG GCGAGCGGAC CCGCCAGCTG GACGGCGCGC ACGTCGAGCT GCTGAGCCAC ATCCGCAACC CGATCGGCGT GAAGCTCGGC CCGACGACCA CGCCTGACGA CGCGCTGGCG CTCGCCGCGA AGCTCAACCC GGACAACGAG CCAGGCCGGC TCACGTTCAT CACCCGCTTC GGTGCCGGCA AGATCCGCGA CGGCCTGCCG ACGCTGGTCG AGAAGGTCAC CGCCGCCGGG CTCGAGGTCG CGTGGGTGTG CGACCCGATG CACGGCAACA CCTTCGAGGC GAGCTCGGGC TACAAGACCC GCCGCTTCGG CGACGTGATC GACGAGGTGC AGGGCTTCTT CGACGTACAC CGCTCGCTCG GCACCTGGCC CGGTGGCCTG CACGTCGAGC TCACCGGCGA CGACGTGACC GAGTGCGTCG GCGGGGGCGA GGACCTGATG GAGGTCGACC TCGGCAACCG CTACGAGTCG GTGTGCGACC CGCGGCTCAA CCGGGTCCAG TCGCTCGAGC TGGCGTTCCT CGTCGCGGAG ATGCTCCGGC AGGCCTGA
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Protein sequence | MSTIPDLATL HAMGAAQQPS YPDRAAVDSA VQRLRTAPPL VFAGECDDLK GKIAQVARGE AFLLQGGDCA ETFAGVTADN VRNKLRVLLQ MAVVLTYAAS VPVVKVGRIA GQYAKPRSSD FETRDGVTLP AYRGDAVNGY DFTAESRVPD PQRLVDVYNS SAATLNLVRA FVTGGYADLR QVHTWNTDFV RESPVGQQYE AMANEIERAL TFMRAIGADP DEFHRVDFHS SHEALVLEYE QALTRIDSRT STPYDVSGHF LWIGERTRQL DGAHVELLSH IRNPIGVKLG PTTTPDDALA LAAKLNPDNE PGRLTFITRF GAGKIRDGLP TLVEKVTAAG LEVAWVCDPM HGNTFEASSG YKTRRFGDVI DEVQGFFDVH RSLGTWPGGL HVELTGDDVT ECVGGGEDLM EVDLGNRYES VCDPRLNRVQ SLELAFLVAE MLRQA
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