Gene Noca_3089 details

Gene Information

• Locus tag: Noca_3089
• ID: 4597874
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 3289614
• End bp: 3291734
• Gene Length: 2121 bp
• Protein Length: 706 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 639777695
• Product: hypothetical protein
• Protein accession: YP_924278
• Protein GI: 119717313

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.679404
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAACA TATCCGAGCG CAACTTGAAG GCGTTTCATG AGGCTGCTCA GTCCTTGAAA 
CTGTACAGAC GCGCGGAGCT TTCGGACGCT CGCGGGGAGT CGCTAGTCGA GCATTTGTAC 
GTGGATCCCT TGCCGAATGA CCACGTTCTC CAGACGATGT TGAAGAGCAA CACTACTTTC 
CTGGTCGGGC GGAAGGGCAC TGGCAAATCG ACGGTCTTCC AGCGCGCGCA ACATGAGTTG 
CGGAAAGCTG GAAAAGCGTC CGCATACATC GACATCAAGA CCATCTACGA ATCCAGCCAG 
GTCGATCCGG GTCTGGCCGC GAAGCTATCG GCAATGCCGG GTGCCATGAA CTTGGACGAG 
ATGGAGTCGT TGCTTCTCCA TCGAGCATTC TTGGCCGCGA TGATCCGAGC AATCCGCGAA 
GAGATCAAGA GCCGAATCAA GGTCTCTCTA TGGCAGAAAG TTAAGAACTC GGTAGGTGGA 
TCCGTGGATG ATCTGTTTGA GGGCTTGGAT GCCCTCCTTG AGGCAGCTGA CGCGGACCGC 
TTTATCAGTG TTGTTTCCAC CCGTTTAGTC GAAGAGCGCA GGCAGGACTC CGACGAGGTC 
ATCAACAAGC AAGGTGTGTC CGGAAAGGTT GGCGCGGGTG CCACAGGGCC CGAGGCCTCC 
CTTGCGTTTG AAGACCAAAC GAGCTACACG TTCGGGTCGG AGCGTGAACG GCAGTTTGCG 
GATATCTTGG TTCGCGTCTT CGACATCAAG TCGTATATAC TGCAACTCAA GGAGTTGCTG 
AATCGAGTCG GACTGACACA GTTGTTCGTC TTCGTAGACG ATTTTTCGGA GCTTCCGCCC 
CCCGCCATGC AGGTCGTCGT AGACGCTCTC CTCGGGCCCT TGAACAATTG GTCTGAAGAG 
TTGATTAAGT TCAAGATCGC TGCCTATCCC GGCCGCATCT ACTACGGCCA AATCGATAAG 
ACGAAGATTG ATGAGATCAG CCTCGACATC TACAGCCTGT ACGGCACCGC CGACATCGCG 
GGGATGGAAG AGAAGGCGGT CGACTTCACG CGCCGTCTGA TCACGCGGCG TCTCGAGCAC 
TTTGGTGTTC AAGCGCTCGG CGATGTCTTC GACACGCGTC GCTCCGGTGG AGATGAATTG 
TGGCGTCAAT TGTTCTTCGC CACCATGGCA AACCCCCGTA ATATTGGCTA CGTATTGTAT 
TTCATGTACG AGTCGAATCT CATCTATGGG CAGAAAATCA ATCTTGCCTC GATCCGGGAC 
GCGGCGCGTA GGTACTACGA GGAAAAGATT GAGGCGTATT TCGCCATGAA TCGATTCCTG 
CACGAGAGCT TCGATGAACG ATCTTCCATC TTTAGTCTCA AAGAACTACT CGACGCCCTC 
GTCATCCGAG CGCGTGAGTT GCGGTATCAC ACCACCTCGG CAGTAATGCG AGACCTCGAA 
GGTCGCCCAC CTACGAGCCA TTTCCACGTT GCGACGCAAA TGGAGGCTCT GCTCGCAACC 
TTGGAGTTGA ACTTCTTCAT CACCAAGTAC TATGTGATGA GTGACCGAGA CGGTCGGAAG 
GTCACCGTTT ACGCCCTTAA CTACGGGCTA TGTCAAAAGC AGAGCATTGA GTTCGGACGT 
CCTGAGGGGA AGCGCGAGTA CCGGCTGTAC TACGTGGAAC GAGTGTTCGA TGTCACTGCG 
ATCCTCCAAG AGTACGTCAG AATGAATCAG GAAATCGTCT GCGACTCATG CGGCCACAAC 
TTCGATCATG AAGCGCTTCC CGCCCTACAA ATGTTTGACA TGCTTTGTCC AGAATGCAGA 
ACGGGCAAGT GTGTCATTAC GAACCTCTCG AAGAAGTACG AGGCCACCCT TCGAGAGATT 
GATCCTGAAC TTCTCCTGCC AAAGGTTGAG CTTGGGATTC TTCACACACT TGGAACCGAA 
GAGCGGGCTC TTTATGCCGC CGAGGTCGCT GGCGAACTGG ACTGCTCGTA TCAACTCGTT 
GGGAAGCGGG CGGTCAACTT GGCCGAGAGA GGCTTGGTGG ATCGTGACAA ATTCGACCAA 
GGGCGCCGCG AGCTGAGGGT TACTGAGTTG GCTCAGCGAA CGTACTTGCG CGATCTAGTC 
GAGGACGTCG AGCCGGATTG A 

 

Protein sequence

MPNISERNLK AFHEAAQSLK LYRRAELSDA RGESLVEHLY VDPLPNDHVL QTMLKSNTTF 
LVGRKGTGKS TVFQRAQHEL RKAGKASAYI DIKTIYESSQ VDPGLAAKLS AMPGAMNLDE 
MESLLLHRAF LAAMIRAIRE EIKSRIKVSL WQKVKNSVGG SVDDLFEGLD ALLEAADADR 
FISVVSTRLV EERRQDSDEV INKQGVSGKV GAGATGPEAS LAFEDQTSYT FGSERERQFA 
DILVRVFDIK SYILQLKELL NRVGLTQLFV FVDDFSELPP PAMQVVVDAL LGPLNNWSEE 
LIKFKIAAYP GRIYYGQIDK TKIDEISLDI YSLYGTADIA GMEEKAVDFT RRLITRRLEH 
FGVQALGDVF DTRRSGGDEL WRQLFFATMA NPRNIGYVLY FMYESNLIYG QKINLASIRD 
AARRYYEEKI EAYFAMNRFL HESFDERSSI FSLKELLDAL VIRARELRYH TTSAVMRDLE 
GRPPTSHFHV ATQMEALLAT LELNFFITKY YVMSDRDGRK VTVYALNYGL CQKQSIEFGR 
PEGKREYRLY YVERVFDVTA ILQEYVRMNQ EIVCDSCGHN FDHEALPALQ MFDMLCPECR 
TGKCVITNLS KKYEATLREI DPELLLPKVE LGILHTLGTE ERALYAAEVA GELDCSYQLV 
GKRAVNLAER GLVDRDKFDQ GRRELRVTEL AQRTYLRDLV EDVEPD