Gene Noca_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3083 
Symbol 
ID4597868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp3282434 
End bp3283324 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content73% 
IMG OID639777689 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_924272 
Protein GI119717307 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0275518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACC AGCGGACCCG GAGGATCGGC GACCTCGTCC GCGAGGGCGA GCGGTCCTTC 
TCGTTCGAGT TCTTCCCTCC GCGCGACGAG GCGGGGGAGG AGCAGCTCTG GTGCGCGATC 
CGCGAGCTCG AGTCGTTCCG GCCCACCTTC GTCTCGGTGA CGTACGGCGC GGGCGGGACC 
ACGCGACACT CCACGGTCCG GATCACCGAG CGGATCGCCG CGGAGACGTC GCTGACCGCG 
ATGGCGCACC TGACCTGCGT GGGGCACACC CGCGCCGAGC TCGAGACGAT CCTCGACACC 
TACGCCGAGG CCGGCATCGG CAACGTGATG GCGCTGCGGG GCGACCCGGC CGAGGGCCCG 
CGGGCCGAGT GGGCGCCCAC CGACGGCGGG CTGACCTACG CCGAGGAGCT GGTCCGGCTG 
GTCCGCGGGC GCGGCGACTT CAGCGTCGGC GTGGCGGCGT TCCCCGAGGG GCACCCGTCC 
GCGACCTCGC TCGACCACGA CGCCGACGTG CTCGTCGCGA AGGCCCGGGC CGGCGCGGAG 
TTCGCCGTCA CCCAGATGTT CTTCCGCGCG TCCGACTACT TCGCGCTCGT CCAGCGGGTC 
CGCGACCGCG GCGTGGACCT GCCGATCCTG CCCGGCATCA TGCCGATCCT GAACCTGGCC 
AACATCCGGC GCCAGGGCGA GCTGATCGGC ACCGAGGTGC CGGCCGAGGT GGTCCGCCGG 
ATCAGCGCCC ACGACGGCGA CCCGATGGCG ATGCGGGCCG AGGGCATCGC GATCGCGGCC 
GAGCTCTGCG ACGAGCTCCT CGCCGGGGGC GCGCCGGGCC TGCACTTCTA CACGCTCAAC 
CGGTCCAAGG CGACCCGCGA GATCTTCGCC GCCCTCAACC TCCCCGTCTG A
 
Protein sequence
MANQRTRRIG DLVREGERSF SFEFFPPRDE AGEEQLWCAI RELESFRPTF VSVTYGAGGT 
TRHSTVRITE RIAAETSLTA MAHLTCVGHT RAELETILDT YAEAGIGNVM ALRGDPAEGP 
RAEWAPTDGG LTYAEELVRL VRGRGDFSVG VAAFPEGHPS ATSLDHDADV LVAKARAGAE 
FAVTQMFFRA SDYFALVQRV RDRGVDLPIL PGIMPILNLA NIRRQGELIG TEVPAEVVRR 
ISAHDGDPMA MRAEGIAIAA ELCDELLAGG APGLHFYTLN RSKATREIFA ALNLPV