Gene Noca_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3063 
Symbol 
ID4600180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3260419 
End bp3261516 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content76% 
IMG OID639777669 
ProductUDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 
Protein accessionYP_924252 
Protein GI119717287 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0458253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTTC TCCTCGCCGG CGGCGGCACC GCCGGCCACA CCTCGCCCCT GCTCGCGACC 
GCCGACGCCC TGCGCCGCCT CGAGCCCGAC GTCGAGATCA CCTGTCTCGG GACGCCCCGC
GGCCTGGAGA ACAAGGTGGT CCCCGAGGCG GGCTACCCGC TCGAGCTGAT CCCGCCGGTG
CCGCTGCCGC GCCGGCCCGG CGCCGACCTG CTCAAGGTCC CGTTCCGGCT GCGGGCGGCG
GTCCGGGCGA CGCATGCCGT GCTCGACCGG GTCCGGCCCG ACGTGGTCGT CGGCTACGGC
GGCTACGTCT CCATGCCGGC GTACGTCGCG ACCCGCAAGC GGGGGATCCC GCTGGTCGTC
CACGAGCAGA ACACCGTGCC CGGGCTGGCC AACCGCGCAG GCGCGCGGTT CGCGCAGCGG
GTCGCGGTGA GCTTCCCGGA CACGCCGTTG CGCAACGCCG AGTACGTCGG GCTCCCCATC
CGTCCGATGA TCTCCGGCCT GGACCGCGCG GCCCGGCGGG CCGAGGCGCG GGCCTTCTTC
GGGCTCGACC CCGACCGCCC CACGCTGCTG GTCACCGGCG GCTCCCAGGG TGCCCGCCGG
CTCAACCAGG CGGTCTCGGC CGCCGCGGGG GCGCTCGCCG CCACCGGTGT CCAGGTGCTG
CACGCCCAGG GCAAGCACGG CGGCGCCGAC CCGCAGCCGG GTGCCGAGGA GACCGGCGTC
CCCTACGTCG TCGTGGAGTA CATCGACCGG ATGGACCTCG CCTACGCCGC GGCCGACCTG
GTGATCTGCC GGGCCGGCGC CAACAGCGTG ACCGAGGCGG CAGCCGTCGG CCTGCCCGCG
GTCTTCGTGC CGCTGCCGAT CGGCAACGGC GAGCAGGAAC GCAACGCGCG GCCGGTGATC
GACGCCGGCG GCGGGATCCT CGTCAAGGAC GCCGACCTCA CCACCGACTG GGTGGTCGGC
ACCGTCCCGC CCCTCGTCGC CGACGCCGAG CGGCTGGCCG CGATGGGTGC CGCCGCGGCC
GCGCTGATCC CGCGCGACGC CGACGAGCGG CTGGCCCGGA TCGTGCTCGA GCTCGGCCTC
GGATCGTCCG CCCGATGA
 
Protein sequence
MRVLLAGGGT AGHTSPLLAT ADALRRLEPD VEITCLGTPR GLENKVVPEA GYPLELIPPV 
PLPRRPGADL LKVPFRLRAA VRATHAVLDR VRPDVVVGYG GYVSMPAYVA TRKRGIPLVV
HEQNTVPGLA NRAGARFAQR VAVSFPDTPL RNAEYVGLPI RPMISGLDRA ARRAEARAFF
GLDPDRPTLL VTGGSQGARR LNQAVSAAAG ALAATGVQVL HAQGKHGGAD PQPGAEETGV
PYVVVEYIDR MDLAYAAADL VICRAGANSV TEAAAVGLPA VFVPLPIGNG EQERNARPVI
DAGGGILVKD ADLTTDWVVG TVPPLVADAE RLAAMGAAAA ALIPRDADER LARIVLELGL
GSSAR