| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3062 |
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| Symbol | |
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| ID | 4600179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3259082 |
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| End bp | 3260422 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639777668 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_924251 |
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| Protein GI | 119717286 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0727112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTGC CCGTCCCCGA CCAGGTGCTG CCCGCCGACC GGCTCGGACG GGTGCACTTC
GTCGGCATCG GTGGCGCCGG CCTGTCCGGC ATCGCCCGGA TCATGCTGGC CCGCGGCATC
ACCGTCAGCG GCAGCGATGG CACCGACTCC CCGACGCTGA CGGCCCTGCG CGAGCTGGGC
GCCCGGGTGC ACCTGGGCCA CGACGCCGCC CACGTCCACG ACGTCGACAC CCTGGTCGTC
TCGACCGCGG TGCGCGAGGA CAACCCGGAG TACGTCGAGG CCGTGCGCCA GGGCCTGCGC
GTGCTGCCGC GATCGGCCGC GCTGGCCGCC GTGATGGCCG GGCGGCGCGT GGTCGCCGTC
GCCGGCACGC ACGGCAAGAC CACCACGACC TCCCTGCTCA CGGTCGCGCT GCAGGCCGCC
GGCGCGGACC CGACGTACGC CATCGGCGGT GACCTGGCTG CGACCGGTGT CAACGCCGCC
GAGGGCACCG GCGACCTGTT CGTCGCCGAG GCCGACGAGA GCGACGGAGC CTTCCTGCAC
TACTCGCCGT ACGCCGCCGT GGTCACCAAC ATCGAGGCCG ACCACCTCGA CCAGTGGGGC
ACGCCGGAGG CCTACGCCGC GGCGTTCGAC GAGTTCGCCG ACACCCTCGC GCCGGACGGC
TTCCTGGTCT GCGTGGCCGA CGATCCCGGT GCCGCGGCGC TCGCCGAGCG GCACCGCGCG
GCCGGGCGGC GGGTGGTGAC CGTCTCCGCC CGCGACGCCG GCGCCCTGGA CGGCGTGACC
CTCTGGTCGC CGGGGGAGCA CTACCTCGCC GACGCGCTGG CCGCGCTCGC CGCCGGCGTC
GAGCTCGGGT ACGCCGCCGC CGACCTGGCC CGCGGGCTCG CGTCGTACAC CGGGACCAAG
CGGCGGATGG AGCGCAAGGG CGAGGCCGGG GGGGTGCGTG TCTACGACAG CTACGCCCAC
CACCCGACCG AGATCGCGGG GGACCTGCAG GCGGCCCGCG CCGTCGCCGG GTCCGGCCGG
GTCGTCGTCG CCTTCCAGCC GCACCTGGTC TCCCGGACCC GGATCTTCGG CACCGCGATG
GGCCGGGCGC TCGGGGCGGC CGACGAGGTC GTGGTGCTCG ACGTCTACCT CGCCCGCGAG
GATCCCGACC CCGAGGTCAC CGGCGCGCTG GTCGCCGGTG CGGTGCCGCT ACCCGCGGAG
CGGGTCGCCT ACGTCGCCGA CTTCGACGCG GTGGCGGCGG AGCTGGTCGC CCGGGCCCGG
CCCGGCGACC TGGTCCTGAC CTTGGGCGCC GGAACCGTCA CGGCGATCGG GCCCCGGGTG
CTGGGGCTGC TGGATGGCTA G
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| Protein sequence | MRLPVPDQVL PADRLGRVHF VGIGGAGLSG IARIMLARGI TVSGSDGTDS PTLTALRELG
ARVHLGHDAA HVHDVDTLVV STAVREDNPE YVEAVRQGLR VLPRSAALAA VMAGRRVVAV
AGTHGKTTTT SLLTVALQAA GADPTYAIGG DLAATGVNAA EGTGDLFVAE ADESDGAFLH
YSPYAAVVTN IEADHLDQWG TPEAYAAAFD EFADTLAPDG FLVCVADDPG AAALAERHRA
AGRRVVTVSA RDAGALDGVT LWSPGEHYLA DALAALAAGV ELGYAAADLA RGLASYTGTK
RRMERKGEAG GVRVYDSYAH HPTEIAGDLQ AARAVAGSGR VVVAFQPHLV SRTRIFGTAM
GRALGAADEV VVLDVYLARE DPDPEVTGAL VAGAVPLPAE RVAYVADFDA VAAELVARAR
PGDLVLTLGA GTVTAIGPRV LGLLDG
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