| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3058 |
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| Symbol | |
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| ID | 4600175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3255406 |
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| End bp | 3256110 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639777664 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_924247 |
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| Protein GI | 119717282 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0278131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACG AGCGCCGCGA CCAGCTCGCC GCCAACCTCG AGACCGTCCG CGACCGGATC
GCCGCGGCCT GCGCCGACGC GGGTCGCGAC CCCGCCGACG TCCGGCTCGT GGTCGTCACC
AAGTTCTTCC CCGCCTCCGA CGTGCGGCTG CTCGCCGAGC TGGGTGTCAC CGACGTCGGC
GAGAACCGCC ACCAGGAGGC CGAGTCGAAG GCCGCCGAGT GCGCCGACCT CGGCCTGCGT
TGGCACTTCA TCGGCGGCCT GCAGAGCAAC AAGGCCGCCG CAGTCGCCGA GTACGCCGAC
GTCGTCGAGT CGGTGGACCG GCTCAAGCTC GTCGGCCCGC TCGGCCGCGG CGCGCAACGG
CGCGACGTGC CGGTCGAGGT GCTGCTCCAG GTCAGCCTCG ACCCCCCCGG CGCCGAGGGC
CGCTCCGGCG CGGACCCGGC CGACCTGCCC GCGCTGGCGG GCGCGGTCGA GCAGGCCGCG
GGGCTGCGGC TGCGAGGCCT GATGGCCGTC GCGCCCCTCG GGGAGGACCC GGCCGCGGCG
TTCGCCCGAC TGGCCGACCT CCGCCGCGAC TTCCTGCTCG AGCGGCCCGA CGCGACCTGG
CTCTCGGCCG GCATGAGCGC GGACCTCGAG GACGCCGTGC GCGTCGGCGC GACACACGTG
CGGATCGGCT CCGCGGTCCT CGGATCGAGA CCGCGGTTCA AGTAG
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| Protein sequence | MSNERRDQLA ANLETVRDRI AAACADAGRD PADVRLVVVT KFFPASDVRL LAELGVTDVG
ENRHQEAESK AAECADLGLR WHFIGGLQSN KAAAVAEYAD VVESVDRLKL VGPLGRGAQR
RDVPVEVLLQ VSLDPPGAEG RSGADPADLP ALAGAVEQAA GLRLRGLMAV APLGEDPAAA
FARLADLRRD FLLERPDATW LSAGMSADLE DAVRVGATHV RIGSAVLGSR PRFK
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