| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3050 |
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| Symbol | dnaE |
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| ID | 4600167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3246765 |
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| End bp | 3250316 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639777656 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_924239 |
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| Protein GI | 119717274 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACCG GCACCCAGGA CTCCTTCGTC CACCTCCACG TCCACACCGA GTACTCCATG
CTCGACGGGG CCTCGCTCCT CGACGGACTG TTCAGCCGGG TGGCCGACCT GCAGATGCCG
GCGATCGCGA TGACCGACCA CGGCAACCTG CACGGTGCGT TCGACTTCTA CTCCAAGGCC
CGCAAGCACG GCGTGAAGCC GATCATCGGC ATCGAGGCCT ACATCACCCC CGGCACCGGC
CGCGGCGAGC GCCGGCGGGT GCGGTGGGGC AAGGGCGACG CGGCCGAGGA GGGCGGCGAC
GACGTCGCCG GCGGCGGCGC CTACACCCAC ATGACGATGT GGGCCGAGAA CACCGAGGGC
ATGCACAACC TGTTCCGGCT CTCCTCGCTG TCCAGCCTCG AGGGCTACTT CTACAAGCCC
CGGATGGACA GGGAGATCCT CCAGCAGCAC AGCAAGGGCA TCATCGTCAG CACCGGCTGC
CCCAGCGGCG CCATCCAGAC CCGGCTCCGG CTGGGCCAGT GGGACGAGGC GGTCCGCGAG
GCCGGGGAGC TGCAGGACAT CTTCGGTCGC GAGAACGTGT TCCTCGAGCT GATGGACCAC
GGCATCTCCA TCGAGAAGCG GGTCCGCGAC GACCTGCTCC GGCTCGGCCG CCAGCTCGGC
ATCCCGCCGC TGGCGACCAA CGACTCGCAC TACAACAACC CCGACGACGC GGACGCCCAC
GACGCCCTGA TCTGTGTGGC CTCCGGCAAG CGGCTCTCCG ACACCAACCG GCTCAAGTTC
GACGGCGGTG GCTACTACAT CAAGTCACCG GCCGAGATGC GCCAGCTCTG GACCCAGCAC
GACCTCGTCG AGGCCTGCGA CAACACCCTC GCCATCGCGG AGCGCTGCGA GGTGGAGTTC
GTCGAGTCCA CGGGCGGCTA CATGGCCCGC GCCGACGTCC CGGCCGGCGA GACCGAGGAC
AGCTGGTTCC GCAAGGAGGT CTGGCGCGGC ATCGAGGCCC GTTATCCCGG CGACCGGCTG
ACCCAGGAGG TCAAGGACCG CGTCGAGATG GAGCTCGCGA TCATCTCGCA GAAGGGCTAC
TGCGGCTACT ACCTCGTGGT CGCCGACTTC ATCCAGTGGT CCAAGCGCAA CGGCATCCGC
GTCGGTCCGG GCCGCGGCTC CGGTGCGGGC TCGATCGCGG CGTACGCACT GAGCATCACC
GACCTCTGCC CGCTCGAGCA CGGGCTGTTC TTCGAGCGCT TCCTCAACCC CGAGCGCCCG
TCGATGCCCG ACTTCGACAT CGACTTCGAC GACCACCGCC GCGGCGAGGT CATCAAGTAC
GTCACCGAGA AGTACGGCGC CGACCGGGTC GCCCAGATCG CCACCTTCGG CCGGCTCAAG
GCGAAGGCCG CGATCAAGGA CGCCGCCCGG GTGCTCGACT TCGGCTTCGC GATCTCCGAC
CGGATCACCA AGGCGCTCCC GGCCGACGTG ATGGGCAAGG GCGTCGCGCT CAAGGACATC
TTCGACCCCG GTCACAAGCG GTACGGCGAG GGCGGCGAGT TCCGGTCGCT GCACGACTCC
GACCCGGACG TGCGCCGGAT CTACGACACC GCGGTCGGGC TCGAGGGCCA GATCCGCAAC
TGGGGCGTGC ACGCGGCCGG CGTGATCATG TCCAGCGAGC CGCTGATCAA CGTCGTGCCG
ATCATGGCCC GCCCGCAGGA CGGCGCGATC ATCACCCAGT TCGACTACCC GATGTGCGAG
TCGCTCGGGC TGGTCAAGAT GGACTTCCTC GGCCTGAGCA ACCTGCACAT CCTCGACGAC
GCGGTCGCGA ACATCGAGGC CAACCGGGGC GAGCAGGTCG TCCTCGAGGA GCTGCCCTTC
GACGACCGGG CGACCTACGA GCTGATGGGT CGCGGGGACA CGCTGGGCGT GTTCCAGCTC
GATGGTGGCG GCATGCGCGC GCTACTGCGC TCGATGCAGC CGGACCAGTT CGCCGACATC
ACCGCGGTCA GCGCGCTCTA CCGGCCCGGC CCGATGGGTG CGGACTCCCA CAACAAGTAC
GCCCGCCGCA AGAACGGCCG CGAGCCGATC GAGCCCATCC ACCCGGCGCT GGCCGAGGCT
CTCGAGCCGG TGCTCGGGGA GACCTACGGC CTGATCGTCT ACCAGGAGCA GGTGATGGCG
ATCGCCCAGG TCCTCGCGGG CTTCACGCTG GGCGCCGCGG ACAACCTGCG CCGGGCGATG
GGCAAGAAGA AGAAGGAGGA GCTCGACAAG CAGTACGCCG GCTTCCAGTC CGGCATGCTC
GAGCGCGGCT TCCCGCAGGC GGCGATCGAC ACGCTCTGGG CGATCCTGCT GCCGTTCTCC
GACTACGCGT TCAACAAGTC GCACTCCGCG GCCTACGGCG TCATCACGTA CTGGACCGCC
TACCTCAAGG CGAACTACCC CGCCGAGTAC ATGGCCGCCC TCCTGACGTC CGCGAAGGAC
GACAAGGACA AGCTCGCCAT CTACCTCAAC GAGTGCCGCC GGATGAAGAT CCAGGTGCTC
CCGCCGGACG TCAACGAGTC GGCCCACAAC TTCACGCCGG TCGGCAACGA CATCCGCTTC
GGCCTGACGG CCGTCCGCAA CGTCGGCAGC AACGTCGTCG ACGGCATCGT CGCTGCCCGC
GAGGAGAAGG GCCGCTACGA GGACTTCAAC GACTTCCTGT CCAAGGTCCC CGCCCAGGTG
TGCAACAAGC GGGTCTTCGA GTCGCTGATC CTGGCCGGCG CCTTCGACGA CATGAAGCAC
AAGCGCCGCG CCCTCCACCT CAAGCACGAG GAGGCGGTGG ACCGCTACGT CGGCCTCAAG
CGCGAGGACG AGGGCCAGGA CTCGCTGTTC GGTGGCTCGG GCTCGGACGA CGTCGTCTTC
GACGTCAGCA TCGCGCTCCC CGACGTCGAC GAGTGGGACA AGATGACCCT GCTCAGCCGC
GAGCGGGAGA TGCTCGGGCT CTACGTCTCC GACCACCCGC TGCTGGGTCT CGAGCACGTG
CTGGCCAACA GCAGCGACTG CAGCATCGGC CAGCTGATGC TCGACGAGGA CCGGCCGGAC
GGGTCCTCGG TCACGATCAG CGGCCTGGTC ACCAGCGTCC AGCGCAAGAT CACCAAGCGC
GGTGACGCGT GGGCGATGGT GACCGTCGAG GACCTGGACG GCGCGATCGA CGTGTTGCTG
TTCCCGAGCG CCTACCAGCT GGCCGGCCCG CACCTGGTCG AGGACGCGAT CCTCACCGTC
AAGGGCCGGC TCTCCCGGCA GAAGGACCAG CCGGAGATCC ACGGCCAGGA GGTCACCGTC
CCCGACCTCT CCGACGGCCC GTCCGGGCCG GTGGTGATCA GCCTCCCCTC CACCCGGTGC
ACGCCGCCGG TCGTCGAGCA GCTCAAGGAC GTCCTCGGCA CCCACCCGGG GATGACCGAG
GTCCGCCTGC GACTCTTGAC CCGTGAGGAG ACCTTGGTCA TGCGCCTCGA CGACCGGCTC
CGGGTCACCC CGAGCCCGGC GCTGTTCGCC GACCTCAAGC AGCTGCTGGG GCCCGGGTGC
CTGACGGGGT GA
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| Protein sequence | MSTGTQDSFV HLHVHTEYSM LDGASLLDGL FSRVADLQMP AIAMTDHGNL HGAFDFYSKA
RKHGVKPIIG IEAYITPGTG RGERRRVRWG KGDAAEEGGD DVAGGGAYTH MTMWAENTEG
MHNLFRLSSL SSLEGYFYKP RMDREILQQH SKGIIVSTGC PSGAIQTRLR LGQWDEAVRE
AGELQDIFGR ENVFLELMDH GISIEKRVRD DLLRLGRQLG IPPLATNDSH YNNPDDADAH
DALICVASGK RLSDTNRLKF DGGGYYIKSP AEMRQLWTQH DLVEACDNTL AIAERCEVEF
VESTGGYMAR ADVPAGETED SWFRKEVWRG IEARYPGDRL TQEVKDRVEM ELAIISQKGY
CGYYLVVADF IQWSKRNGIR VGPGRGSGAG SIAAYALSIT DLCPLEHGLF FERFLNPERP
SMPDFDIDFD DHRRGEVIKY VTEKYGADRV AQIATFGRLK AKAAIKDAAR VLDFGFAISD
RITKALPADV MGKGVALKDI FDPGHKRYGE GGEFRSLHDS DPDVRRIYDT AVGLEGQIRN
WGVHAAGVIM SSEPLINVVP IMARPQDGAI ITQFDYPMCE SLGLVKMDFL GLSNLHILDD
AVANIEANRG EQVVLEELPF DDRATYELMG RGDTLGVFQL DGGGMRALLR SMQPDQFADI
TAVSALYRPG PMGADSHNKY ARRKNGREPI EPIHPALAEA LEPVLGETYG LIVYQEQVMA
IAQVLAGFTL GAADNLRRAM GKKKKEELDK QYAGFQSGML ERGFPQAAID TLWAILLPFS
DYAFNKSHSA AYGVITYWTA YLKANYPAEY MAALLTSAKD DKDKLAIYLN ECRRMKIQVL
PPDVNESAHN FTPVGNDIRF GLTAVRNVGS NVVDGIVAAR EEKGRYEDFN DFLSKVPAQV
CNKRVFESLI LAGAFDDMKH KRRALHLKHE EAVDRYVGLK REDEGQDSLF GGSGSDDVVF
DVSIALPDVD EWDKMTLLSR EREMLGLYVS DHPLLGLEHV LANSSDCSIG QLMLDEDRPD
GSSVTISGLV TSVQRKITKR GDAWAMVTVE DLDGAIDVLL FPSAYQLAGP HLVEDAILTV
KGRLSRQKDQ PEIHGQEVTV PDLSDGPSGP VVISLPSTRC TPPVVEQLKD VLGTHPGMTE
VRLRLLTREE TLVMRLDDRL RVTPSPALFA DLKQLLGPGC LTG
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