Gene Noca_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3048 
Symbol 
ID4600165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3244551 
End bp3246152 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content73% 
IMG OID639777654 
Producthypothetical protein 
Protein accessionYP_924237 
Protein GI119717272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGAACA GCCCGGAGTA CCTCGAGAGC GGAGCCGGCG AACCGCTCCG GACCCCGTCC 
GAACCGACCG GTGGCGGGCG CCGCCGCACC GGCTGGATCG TCGGCGGGGC GGTGGCCTTC
GTCGCCCTGG TCGGCGCCGG CGCGTGGGCG GCCTGGTCGT TCTTCGCCAC CGGCCCGCAG
CCGGCCGAGG CACTGCCCGG CTCGACGATC GCCTACGCCA GCGTCGACCT CGACCCGAGC
GGTGGCCAGA AGATCGAGGC GCTGCGGACG CTGCGCAAGT TCCCGGCGTT CAAGGACCAC
ATCGGGCTCC AGACCGACGA CGACGTCCGT CAACGGATCT TCGAGGAGAT CCAGGGCTCC
GGCGCCTGCC CGGACCTCGA CTACGGCGAC GACGTCGAGC CCTGGCTCGG CGACCGGATC
GCCGTCGCCG CGGTCGACGC GGGCGAGGAC GCTCTGTCTC CCGTGTTCGT GCTCCAGGTG
AGCGACGAGG ACCAGGCGGA CCAGGGGCTG GCGAAGATCC AGGACTGCAG CGGCGGCGAC
GGCGGCGCCT GGTCGATCGC CGACGGCTGG GCGCTGGTGG GGGAGACCCA GGAGATCGTC
GACCGGGTCG CCGCCGACGC CGCGAAGTCC CCGCTCTCGG ACGACGAGGA CTACCGCACC
TGGACCGACG CGGCCGGCGA CGCCGGGATC GCGACGGCCT ACCTCGCCCC CGAGGCCGGG
CAGGTCCTCG CCGACAACCT CGGCGGACTG ATGCCGCCGA TGTACGGGCT CGGCGAGGCC
GTCCCCGGCT CCGACACCGA CCTGATGCCC TCCGAGGTCA CCCAGGGCCT CGAGGAGTTC
CGCGGCCTGG CCGCCACCCT CCGCTTCGAC GACGGCTCGC TCGAGCTGGA GGTGGCCGCC
GACACCGGCA GGTCCCAGGA CGCGCTCGAC GGCGCCGACG GCGGGGACGA CGTGCTGGCA
ACGCTGCCCG ACGACACCGC GGCCGCGCTG GGCCTCGGGT TCGCCGACGG GTGGTTCGGC
GACCTCGTCG ACCAGTTCGC CGGCCAGCTC GGCGGTGACC TGAGCGGCGA CGAGCTCCTC
GACGAGCTCT CCTCAGAGTC CGGCCTCGAC CTGCCCGAGG ACGTCGAGAC GCTGACCGGC
GAGTCCGCCG CGCTGGCCAT CGGGGGCGAC TTCGACCTCG AGACGTTCGT GAACTCCACG
GACGGCAGCG GCGTGCCGGT CGGGCTGAAG GTCCAGGGCG ACCCGGACGC GATCGAGACG
GTGCTGGACA AGCTGCGCCC CCAGCTCGAC GGCGCCGAGT CCTTCCTCGG CAGTGACAGC
GACGGCGACC TGATCGCCAT CGGCCCCGAC GGCGACTACC GCCAGCAGCT GCTCGAGGAC
GGGGACCTCG GGGACTCCGA GGTGTTCGAG AACGTCGTGC GCGAGGCCGG AGACGCGGCC
GCGATCCTGT TCGTGAACTT CGACGCCGGG GACTGGCTGG CCAGCCTCGC GGACGGTGAC
CCGGAGGTCG AGGAGAACCT CGAGCCGCTG CAGGGCCTCG GCCTGAGCGG CTGGCTCCAG
GACGACGCCA GCCACGTGGT GCTCCGGCTC ACGACCGACT GA
 
Protein sequence
MENSPEYLES GAGEPLRTPS EPTGGGRRRT GWIVGGAVAF VALVGAGAWA AWSFFATGPQ 
PAEALPGSTI AYASVDLDPS GGQKIEALRT LRKFPAFKDH IGLQTDDDVR QRIFEEIQGS
GACPDLDYGD DVEPWLGDRI AVAAVDAGED ALSPVFVLQV SDEDQADQGL AKIQDCSGGD
GGAWSIADGW ALVGETQEIV DRVAADAAKS PLSDDEDYRT WTDAAGDAGI ATAYLAPEAG
QVLADNLGGL MPPMYGLGEA VPGSDTDLMP SEVTQGLEEF RGLAATLRFD DGSLELEVAA
DTGRSQDALD GADGGDDVLA TLPDDTAAAL GLGFADGWFG DLVDQFAGQL GGDLSGDELL
DELSSESGLD LPEDVETLTG ESAALAIGGD FDLETFVNST DGSGVPVGLK VQGDPDAIET
VLDKLRPQLD GAESFLGSDS DGDLIAIGPD GDYRQQLLED GDLGDSEVFE NVVREAGDAA
AILFVNFDAG DWLASLADGD PEVEENLEPL QGLGLSGWLQ DDASHVVLRL TTD