Gene Noca_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3016 
Symbol 
ID4596463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3212680 
End bp3213462 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID639777621 
ProductABC transporter related 
Protein accessionYP_924205 
Protein GI119717240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGG CGACCAGCGC GGCCGAGGAC GCGGCCCGCG AGGAGCACCT CGCCCACGCC 
GAGGGCGCCG TGCTGCGCGC CGACGAGCTG ATCGCGGGCT ACCTGCCCGG GGTGAACATC
CTCAACGGCT CCAACCTCTA CTGCAAGGAG GGCGAGCTGG TCGGCATCAT CGGCCCGAAC
GGCGCCGGCA AGTCGACGCT GCTCAAGGCG CTCTTCGGGC TCGTGAAGAT CTCCTCGGGC
AGCGTTCGGC TCAAGGGCCA GGAGATCACC AACGAACGCG CAGACAGCCT GGTGTCCAAG
GGCATCGGCT TCGTCCCGCA GACCAACAAC GTGTTCCCCT CGCTCACGAT CCGCGAGAAT
CTCGAGATGG GCTGCTACCA GAGCCCGGAG TCGTTCAAGA AGCGCTTCGA GTTCGTCGGC
GAGCTGTTCC CCGCCCTGCA CGACCGGCGC GCCCAGCGGG CCGGCTCGTT GTCCGGGGGC
GAGCGGCAGA TGGTCGCGAT GGGCCGGGCC CTGATGATGG ACCCGTCGGT CCTCCTCCTC
GACGAGCCCT CCGCGGGGCT CTCCCCCGTC ATGCAGGACG AGGTGTTCGT CCAGACCCGC
CGGATCAACC GGGCCGGCGT CTCGGTGATC ATGGTCGAGC AGAACGCCCG GCGCTGCCTG
CAGATCTGCG ACCGCGGCTA CGTCCTCGAC CAGGGCCGCA ACGCCTACAC CGGCACCGGC
AAGGCCCTCG GCAACGACCC GAAGGTCATC GAGCTCTACC TCGGCACCCT CGCCCAGGCC
TGA
 
Protein sequence
MSEATSAAED AAREEHLAHA EGAVLRADEL IAGYLPGVNI LNGSNLYCKE GELVGIIGPN 
GAGKSTLLKA LFGLVKISSG SVRLKGQEIT NERADSLVSK GIGFVPQTNN VFPSLTIREN
LEMGCYQSPE SFKKRFEFVG ELFPALHDRR AQRAGSLSGG ERQMVAMGRA LMMDPSVLLL
DEPSAGLSPV MQDEVFVQTR RINRAGVSVI MVEQNARRCL QICDRGYVLD QGRNAYTGTG
KALGNDPKVI ELYLGTLAQA