Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3016 |
Symbol | |
ID | 4596463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3212680 |
End bp | 3213462 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639777621 |
Product | ABC transporter related |
Protein accession | YP_924205 |
Protein GI | 119717240 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAGG CGACCAGCGC GGCCGAGGAC GCGGCCCGCG AGGAGCACCT CGCCCACGCC GAGGGCGCCG TGCTGCGCGC CGACGAGCTG ATCGCGGGCT ACCTGCCCGG GGTGAACATC CTCAACGGCT CCAACCTCTA CTGCAAGGAG GGCGAGCTGG TCGGCATCAT CGGCCCGAAC GGCGCCGGCA AGTCGACGCT GCTCAAGGCG CTCTTCGGGC TCGTGAAGAT CTCCTCGGGC AGCGTTCGGC TCAAGGGCCA GGAGATCACC AACGAACGCG CAGACAGCCT GGTGTCCAAG GGCATCGGCT TCGTCCCGCA GACCAACAAC GTGTTCCCCT CGCTCACGAT CCGCGAGAAT CTCGAGATGG GCTGCTACCA GAGCCCGGAG TCGTTCAAGA AGCGCTTCGA GTTCGTCGGC GAGCTGTTCC CCGCCCTGCA CGACCGGCGC GCCCAGCGGG CCGGCTCGTT GTCCGGGGGC GAGCGGCAGA TGGTCGCGAT GGGCCGGGCC CTGATGATGG ACCCGTCGGT CCTCCTCCTC GACGAGCCCT CCGCGGGGCT CTCCCCCGTC ATGCAGGACG AGGTGTTCGT CCAGACCCGC CGGATCAACC GGGCCGGCGT CTCGGTGATC ATGGTCGAGC AGAACGCCCG GCGCTGCCTG CAGATCTGCG ACCGCGGCTA CGTCCTCGAC CAGGGCCGCA ACGCCTACAC CGGCACCGGC AAGGCCCTCG GCAACGACCC GAAGGTCATC GAGCTCTACC TCGGCACCCT CGCCCAGGCC TGA
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Protein sequence | MSEATSAAED AAREEHLAHA EGAVLRADEL IAGYLPGVNI LNGSNLYCKE GELVGIIGPN GAGKSTLLKA LFGLVKISSG SVRLKGQEIT NERADSLVSK GIGFVPQTNN VFPSLTIREN LEMGCYQSPE SFKKRFEFVG ELFPALHDRR AQRAGSLSGG ERQMVAMGRA LMMDPSVLLL DEPSAGLSPV MQDEVFVQTR RINRAGVSVI MVEQNARRCL QICDRGYVLD QGRNAYTGTG KALGNDPKVI ELYLGTLAQA
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