Gene Noca_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3015 
Symbol 
ID4596462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3211704 
End bp3212687 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID639777620 
ProductABC transporter related 
Protein accessionYP_924204 
Protein GI119717239 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTG AGTCCGAAGG CGGGGCCGTC ACCGCCCCCA CCCACCGCCC GTCCGGAACG 
GCTGCGGCCA TGTTCACCGA CGTGCCCCAC GAGCCGGGCG CCGCGAAGCC GGACCCGATC
GTGGTCGCGG ACGACATCAC CCGCACCTTC GGCGGCCTCA CCGCCGTCGA CGTCGAGCAC
GTGGAGATCC AGCGGGGTGC GATCACGGCG CTGATCGGTC CCAACGGTGC CGGCAAGACC
ACGTTCTTCA ACCTGCTGAC CGGCTTCGAC CGGCCCGACT CCGGCGACTG GTCCTTCAAC
GGGCGCAGCC TCCGCAAGGT GCCGGCCTCA CGGGTGGCCC GGATGGGCAT GGTGCGCACC
TTCCAGCTGA CGAAGGTGCT CTCCAAGCTC ACCGTCATCG AGAACATGCG CACCGGCGCC
CCCCACCAGG CTGGCGAGAA CCTCCTCAAG GCGATGTTCG CCCCGCTGTG GCGCGCCCAG
GAGGAGGAGA ACACCCGCAA GGCCGACGCC CTGCTCGAGC GCTTCTTGCT GATCAAGAAG
CGCGAGGACT TCGCGGGCTC GCTGTCCGGC GGGCAGCGCA AGCTGCTGGA GATGGCACGC
GCCCTGATGG CCGACCCCGA GCTGGTCATG CTCGACGAGC CGATGGCGGG GGTGAACCCC
GCCCTCAAGC AGTCGCTGCT GGGCCACGTG AAGGCGTTGC GCGACGAGGG CCGCACGGTG
CTCTTCGTCG AGCACGACAT GGACATGGTC CGCGACATCT CCGACTGGGT CGTGGTGATG
GCCCAGGGGC GGGTGATCGC GGAGGGACCG CCGGACTCGG TGATGAGCGA CACCCGGGTG
ATCGACGCCT ACCTGGGCGC CCACCACGAC ACGGTGCTGG ACTTCGAGGC AGAGGAGCAG
ATCCTCGAGG CCGCGGAGGC CGAGCTCGCC GCCGAGCACG CCGACCACGA GGACCACGAC
ACCAAGGGGG ATCGCGATGT CTGA
 
Protein sequence
MAAESEGGAV TAPTHRPSGT AAAMFTDVPH EPGAAKPDPI VVADDITRTF GGLTAVDVEH 
VEIQRGAITA LIGPNGAGKT TFFNLLTGFD RPDSGDWSFN GRSLRKVPAS RVARMGMVRT
FQLTKVLSKL TVIENMRTGA PHQAGENLLK AMFAPLWRAQ EEENTRKADA LLERFLLIKK
REDFAGSLSG GQRKLLEMAR ALMADPELVM LDEPMAGVNP ALKQSLLGHV KALRDEGRTV
LFVEHDMDMV RDISDWVVVM AQGRVIAEGP PDSVMSDTRV IDAYLGAHHD TVLDFEAEEQ
ILEAAEAELA AEHADHEDHD TKGDRDV