Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3012 |
Symbol | |
ID | 4596459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3208377 |
End bp | 3209111 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639777617 |
Product | ABC transporter related |
Protein accession | YP_924201 |
Protein GI | 119717236 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.197193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCC CCGCGATCCA GGTCTCGAAC CTGCACAAGT ACTTCGGTGA GCACGAGGTG CTCAAGGGCA TCGACTTCCA CGTCGACCAG AGCCAGGTCG TGTGCGTGAT CGGCCCGTCC GGTTCCGGCA AGTCGACGCT GCTGCGCTGC GTCAACCGGC TGGAGGAGCC CACGTCGGGC AAGATCCTGA TCGAGGGGAT CGACATCACC GACCCCGAGA CCGACCTCGA CGCGGTCCGC TCCCGCATCG GGATGGTGTT CCAGCAGTTC AACCTGTTCC CCCACATGAA CGTGCTCAGC AACCTGTGCG TGGCCCAGCG ACGGGTCAAG AAGCGCTCGA AGGACCAGGC CGTCGAGGTC GCCCGCGTCA ACCTCGCGAA GGTCGGGCTG GCGGGCCGCG AGAACGTCTA TCCGGCCCAT CTCTCCGGCG GCCAGCAGCA GCGGGTCGCG ATCGCCCGGG CGCTCTCGAT GAACCCGGAC ATGATGCTCT TCGACGAGCC CACCAGCGCG CTCGACCCGG AGCTGGTCGG CGACGTGCTG GCCGTCATGA GGGACCTGGC GTCGGAGGGC ATGACGATGA TGGTCGTCAC CCACGAGATG GGCTTCGCCC GCGAGGTCGG CGACCGGCTG GTCTTCATGG ACGACGGCGT GATCGTCGAG GAGGGCGACC CGCGTGAGGT GCTCGCCAAC CCCCAGCACC AGCGCACCCA GGCGTTCCTC TCGAAGGTCC TCTGA
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Protein sequence | MSTPAIQVSN LHKYFGEHEV LKGIDFHVDQ SQVVCVIGPS GSGKSTLLRC VNRLEEPTSG KILIEGIDIT DPETDLDAVR SRIGMVFQQF NLFPHMNVLS NLCVAQRRVK KRSKDQAVEV ARVNLAKVGL AGRENVYPAH LSGGQQQRVA IARALSMNPD MMLFDEPTSA LDPELVGDVL AVMRDLASEG MTMMVVTHEM GFAREVGDRL VFMDDGVIVE EGDPREVLAN PQHQRTQAFL SKVL
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