Gene Noca_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3012 
Symbol 
ID4596459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3208377 
End bp3209111 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID639777617 
ProductABC transporter related 
Protein accessionYP_924201 
Protein GI119717236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.197193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC CCGCGATCCA GGTCTCGAAC CTGCACAAGT ACTTCGGTGA GCACGAGGTG 
CTCAAGGGCA TCGACTTCCA CGTCGACCAG AGCCAGGTCG TGTGCGTGAT CGGCCCGTCC
GGTTCCGGCA AGTCGACGCT GCTGCGCTGC GTCAACCGGC TGGAGGAGCC CACGTCGGGC
AAGATCCTGA TCGAGGGGAT CGACATCACC GACCCCGAGA CCGACCTCGA CGCGGTCCGC
TCCCGCATCG GGATGGTGTT CCAGCAGTTC AACCTGTTCC CCCACATGAA CGTGCTCAGC
AACCTGTGCG TGGCCCAGCG ACGGGTCAAG AAGCGCTCGA AGGACCAGGC CGTCGAGGTC
GCCCGCGTCA ACCTCGCGAA GGTCGGGCTG GCGGGCCGCG AGAACGTCTA TCCGGCCCAT
CTCTCCGGCG GCCAGCAGCA GCGGGTCGCG ATCGCCCGGG CGCTCTCGAT GAACCCGGAC
ATGATGCTCT TCGACGAGCC CACCAGCGCG CTCGACCCGG AGCTGGTCGG CGACGTGCTG
GCCGTCATGA GGGACCTGGC GTCGGAGGGC ATGACGATGA TGGTCGTCAC CCACGAGATG
GGCTTCGCCC GCGAGGTCGG CGACCGGCTG GTCTTCATGG ACGACGGCGT GATCGTCGAG
GAGGGCGACC CGCGTGAGGT GCTCGCCAAC CCCCAGCACC AGCGCACCCA GGCGTTCCTC
TCGAAGGTCC TCTGA
 
Protein sequence
MSTPAIQVSN LHKYFGEHEV LKGIDFHVDQ SQVVCVIGPS GSGKSTLLRC VNRLEEPTSG 
KILIEGIDIT DPETDLDAVR SRIGMVFQQF NLFPHMNVLS NLCVAQRRVK KRSKDQAVEV
ARVNLAKVGL AGRENVYPAH LSGGQQQRVA IARALSMNPD MMLFDEPTSA LDPELVGDVL
AVMRDLASEG MTMMVVTHEM GFAREVGDRL VFMDDGVIVE EGDPREVLAN PQHQRTQAFL
SKVL