Gene Noca_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3009 
Symbol 
ID4596456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3205949 
End bp3206695 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID639777614 
Producthypothetical protein 
Protein accessionYP_924198 
Protein GI119717233 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCCCG GTTTCGGCAC CGTCGTCAAC GTCGCCACCG TGCTGCTCGG CGCCACCGTC 
GGGGTCCTGC TCGGCAACCG CCTGCCGGTC CGCACCCGCG ACCTGGTCAC CGACGCCCTG
GGCCTGGTCA CGCTGCTGAT CGCCGGCACG TCGGCGATGG CGGTGCTCGA CGACGACCTC
GCCGACCAGG TCGGCGACAG CGCGCCGATG CTGATCGTCC TGGGCGCGCT GCTGGTCGGC
GGGATCACCG GGTCGCTGCT CCGGCTCGAG CAGCGGGTGG AGGCGCTGGG CGGCTGGCTG
CAGGCCCGGC TCACCCGGGA GAGCGGGTCG GTCGAGCGGC ACCGGTTCGT CGAGGGGTTC
GTCGTCTCCT CGCTCGTCTT CTGCACCGGC CCGCTGACCG TCCTCGGATC GCTCAACGAC
GGCCTCGGGA ACGGCGCCGA CCAGCTCCTC CTCAAGGCCG CCCTCGACGG GTTCGCGGCG
ATCGCCTTCG CCGCCTCCTT CGGCTGGGGG GTCGCGGCGA GCGCGCTCAC GGTCGTGGTC
GTCCAGGGCT CGCTCACCCT GCTCGGCCTG GCCCTCGGCG ACGTGCTCCC CGACGCCCAC
CTGGCTGCGG TCACGGCGAC CGGAGGACTG CTGCTGGTCG GCGTCGCGAT GCGGCTGCTG
CGGGTGCGCG AGATCCCCGT GGCCGACCTG CTCCCCGCGC TCGTCGTCGC GCCGCTGCTG
GTCGAGGTTG CCGCGACGCT GCACTGA
 
Protein sequence
MIPGFGTVVN VATVLLGATV GVLLGNRLPV RTRDLVTDAL GLVTLLIAGT SAMAVLDDDL 
ADQVGDSAPM LIVLGALLVG GITGSLLRLE QRVEALGGWL QARLTRESGS VERHRFVEGF
VVSSLVFCTG PLTVLGSLND GLGNGADQLL LKAALDGFAA IAFAASFGWG VAASALTVVV
VQGSLTLLGL ALGDVLPDAH LAAVTATGGL LLVGVAMRLL RVREIPVADL LPALVVAPLL
VEVAATLH