| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3006 |
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| Symbol | |
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| ID | 4596453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3202076 |
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| End bp | 3204745 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777611 |
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| Product | DNA polymerase I |
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| Protein accession | YP_924195 |
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| Protein GI | 119717230 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCCGCC TCCTGCTCCT CGACGGCCAC TCGCTCGCGT ATCGCGCGTT CTTCGCGCTG
CCGGTGGAGA ACTTCTCGAC CACGACCGGC CAGCACACCA ACGCGGTCTA CGGCTTCACC
TCGATGCTGA TCAACGTGCT GCGCGACGAG CAGCCGACCC ACGTGGGCGT GGCGTTCGAC
GTGTCCCGGC AGACCTTCCG GCTGGAGGAG TACGCCGACT ACAAGGCCAA GCGCAACAAG
ACGCCGACCG AGTTCAGCAG CCAGCTGCCG CTGATCGAGG AGGTCCTCAA CGCGCTGCGG
ATCCCGTTCC TGAAGAAGGA CGGCTACGAG GCCGACGACA TCATCGCCAC GCTGGTCACC
CGCGCGCTCG AGGACCCCGA GATGGAGGTG CTGATCCTCA CCGGCGACCG TGACTCGCTC
CAGCTGGTCA CCGACCGCTC GACCGTGCTC TACCCGATGC GGGGGGTCTC CGACCTGGCC
CGGATGACGC CGGCAGCGGT CGAGGCCAAG TACGGCGTCC CGCCGGCGCG CTACCCCGAG
CTCGCGGCGA TCGTGGGGGA GACCTCCGAC AACCTCCCGG GTGTGCCGGG GGTCGGCCAG
GGCTACGCGG CGAAGTGGAT CAACCAGTTC GACGGCCTCG ACAACGTGAT CGCCCGCGCC
GACGAGATCA CCGGCAAGAA GGGCGAGGCG CTGCGGGCCC ACCTCGGCGA CGTGATCCGC
AACCGCCACC TCAACGCCCT CGTGTGCGAC CTCGAGCTCG ACCGGACCCC CGAGCAGCTC
GCGGTGCAGC CGTGGGACCG CCACGAGGTG CACACGCTCT TCGACGGCCT CGAGTTCCGG
GTGCTGCGCG ACCGCCTCTT CGAGACGCTC ACCTCGGAGG AGGAGATCGA CGACTCCGGC
TTCGACGTCG CGATGAGCGT GCTGGGCGCC GGCGCGCTGG CGGCGTGGCT CGAGCAGCAC
ACCGCCTCCG GCGAGCGGGT CGGCCTGCAC GTCGCGGGGC ACTGGAGCGC GGGCACCGGT
GACGTGACGT CGTTGGCGCT GGCGACCACC GACGGCCTCG CGGCCTGGGT CGCCGCCGAC
CAGCTCGACG TGGCCGACCA GACCGCGCTC GCCGGGTGGC TGGCCGATCC CAAGCGGCCC
AAGGTGCTCC ACGACGCGAA GGGGCCGATG CTCGCCCTGG CCGCCTGGGG CCTGCCGCTG
GCCGGCCTGG ACCGGGACAC CGCGCTCTCG GCGTACCTCG CCCGGCCCGA CCAGCGCTCC
TACGACCTGG CGGACCTGAC CGTGCGCTAC CTCAAGCGTG AGCTCAAGCA GGGTGGAGCC
GACGACGGCC AGCTCAGCCT CGACGGCCTG GACGACCGGA ACGCCGGCGA GATCGAGATG
CTGCACGCCC GGGCCGTCCT CGACCTGGCC GCAGCGCTGG ACGACGAGCT CGAGGAGCGC
GGCGGCACCC GCCTGCTCAA CGACATCGAG CTGCCGCTGG TCGACCTGCT CGCCAAGATG
GAGCAGACCG GCATCGCCGT CGACACCGAC CACCTCGAGG CGCTGGAGAG CCACTTCGCC
GCCGAGGTGC GCGACGCGGC CGAGCAGGCG TTCGGCGTGA TCGGCAAGGA GATCAACCTC
GGCTCGCCCA AGCAGCTGCA GGCCGTGCTG TTCGACGAGC TCGGGATGCC GAAGACCAAG
CGCACCAAGA CCGGCTACAC GACCGACGCG GACGCGCTCC AGGCGCTGTA CGTCAAGACC
GAGCACCCGT TCCTGCTGCA CCTGCTGCGC CACCGCGACG TGTCCCGGCT GCGCCAGACG
ATCGAGGGCC TGCTCAAGAC CGTCGCGGGC GACGGCCGCA TCCACACGAC GTTCAACCAG
ACGATCGCCG CGACCGGCCG CCTGTCCAGC ACCGAACCCA ACCTCCAGAA CATCCCGATC
CGCACCGAGG AGGGCCGCCG GATCCGCGAG GGCTTCGTGG TCGGTCCGGG GTACGAGTCG
TTGATGACCG CCGACTACAG CCAGATCGAG ATGCGGATCA TGGCGCACCT GTCCGAGGAC
GACCTGCTGA TCGAGGCGTT CAAGTCCGGT CGCGACTTCC ACTCGATCAC CGCCGCCCGG
GTCTTCGACG TGCCGGCCGA CGACGTCACG GTCGAGATGC GGGCCAAGAT CAAGGCGATG
AACTACGGCC TGGCCTACGG CCTGTCCGCG TTCGGCCTGG GCCAACAGCT CGGCATCGAG
CCGAGCGAGG CCCGCGGGCT GATGGACGAG TACTTCCAGA CCTTCGGCGG GATCCGCGAC
TACCTCGGCG GCGTCGTCGA GGAGGCCCGC AAGGCCGGGT TCACCGAGAC CATCTGGGGC
CGTCGCCGCT ACCTGCCCGA CCTCACGAGC GACAACCGCC AGCGCCGCGA GATGGCCGAG
CGGATGGCGC TGAACGCGCC GATCCAGGGC TCGGCCGCCG ACCTGATCAA GATCGCGATG
CTCAACGTCG ACCGGGCGAT CGCCGCCGCC GGGCTGGCCT CGCGGATGCT GCTCCAGGTG
CACGACGAGC TCGTGTTCGA GGTGGCGCCG GGGGAGCAGG AGCCGCTCGA GGTCCTGGTC
CGCGAGCAGA TGGGCGCCGC CGCGGACCTC GCCGTACCCC TCGACGTGAG CGTGGGCTTC
GGCCGCAGCT GGCACGAGGC GGCCCACTGA
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| Protein sequence | MPRLLLLDGH SLAYRAFFAL PVENFSTTTG QHTNAVYGFT SMLINVLRDE QPTHVGVAFD
VSRQTFRLEE YADYKAKRNK TPTEFSSQLP LIEEVLNALR IPFLKKDGYE ADDIIATLVT
RALEDPEMEV LILTGDRDSL QLVTDRSTVL YPMRGVSDLA RMTPAAVEAK YGVPPARYPE
LAAIVGETSD NLPGVPGVGQ GYAAKWINQF DGLDNVIARA DEITGKKGEA LRAHLGDVIR
NRHLNALVCD LELDRTPEQL AVQPWDRHEV HTLFDGLEFR VLRDRLFETL TSEEEIDDSG
FDVAMSVLGA GALAAWLEQH TASGERVGLH VAGHWSAGTG DVTSLALATT DGLAAWVAAD
QLDVADQTAL AGWLADPKRP KVLHDAKGPM LALAAWGLPL AGLDRDTALS AYLARPDQRS
YDLADLTVRY LKRELKQGGA DDGQLSLDGL DDRNAGEIEM LHARAVLDLA AALDDELEER
GGTRLLNDIE LPLVDLLAKM EQTGIAVDTD HLEALESHFA AEVRDAAEQA FGVIGKEINL
GSPKQLQAVL FDELGMPKTK RTKTGYTTDA DALQALYVKT EHPFLLHLLR HRDVSRLRQT
IEGLLKTVAG DGRIHTTFNQ TIAATGRLSS TEPNLQNIPI RTEEGRRIRE GFVVGPGYES
LMTADYSQIE MRIMAHLSED DLLIEAFKSG RDFHSITAAR VFDVPADDVT VEMRAKIKAM
NYGLAYGLSA FGLGQQLGIE PSEARGLMDE YFQTFGGIRD YLGGVVEEAR KAGFTETIWG
RRRYLPDLTS DNRQRREMAE RMALNAPIQG SAADLIKIAM LNVDRAIAAA GLASRMLLQV
HDELVFEVAP GEQEPLEVLV REQMGAAADL AVPLDVSVGF GRSWHEAAH
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