| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2980 |
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| Symbol | |
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| ID | 4595618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3168409 |
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| End bp | 3169368 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777585 |
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| Product | sigma-70 region 3 domain-containing protein |
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| Protein accession | YP_924169 |
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| Protein GI | 119717204 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.186963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTAC GCACCGCCGT CAGCGCAGGC ACTCGAGAGA TCGAGGGCCG CGACAGCGTC
GGCCTGTACC TCGACGAGAT CGCCCGCAAC CCCCTGCTCG ACGCCGCCTC CGAGGTGGAG
CTGTCGAAGG CGATCGAGGC CGGCCTGATG GCCGAGCACC TGCTCGCCGA GGGCCGGGTC
GGCCGCAAGA AGGGTGGCGC GCCGATGACG GCCACCGCCG AGGAGCTGGA GTGGCTCGCC
GAGGAGGGCC GCAAGGCCGT CGACACGTTC ATCACCGCCA ACCTGCGCCT GGTCGTCTCG
ATCGCGCGGA AGTACGGCCG TGCCCAGATG CCGATGCTGG ACCTGATCCA GGAGGGCAAC
ACCGGCCTGA TCCGCGCGGT GGAGAAGTTC GACTACACCA AGGGCTACAA GTTCTCGACC
TACGCGACCT GGTGGGTCCG CCAGGCGATC ACCCGCGGCA TCGCCCAGCA GGCCCGCGTG
GTCCGGCTGC CGGTGCACGT GGTCGAGGAG CTCAACCAGG TCGGCGGCGC GCGCCGCACC
CTGGAGCGCA AGCTGGGCCG TGAGCCGGAG CCGCGCGAGA TCGCCGAGGA GCTCGGCATG
GAGGTCGACC GGGTCCTGGA CCTGATGGCC TGGGGCCGCG AGCACGTCAG CCTCGACTCC
CCCGTCGACG AGGATGGCGA CACCTCGCTG GGCGACCTGA TGGCCCAGGA GACCGCGCCG
GGCCCGGACC TGAACTTCAT CGACGTCGAG TCCCGCGACC GGCTCAACAG CCTGGTCGGC
AAGCTCGACG ACCGCGCGGC GGACATCATC CGCTCGCGCT ACGGACTGGT CGACGGGCGC
CAGCACAAGC TCGCCGACAT CGGCGCCAAG CACGGCATCT CCGCCGAGCG GGTGCGCCAG
CTCGAACGCG AGGCGCTGCA GAAGCTCCGC CGCTTGGGCG ACCCGGACCT CGCGGCCTGA
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| Protein sequence | MAVRTAVSAG TREIEGRDSV GLYLDEIARN PLLDAASEVE LSKAIEAGLM AEHLLAEGRV
GRKKGGAPMT ATAEELEWLA EEGRKAVDTF ITANLRLVVS IARKYGRAQM PMLDLIQEGN
TGLIRAVEKF DYTKGYKFST YATWWVRQAI TRGIAQQARV VRLPVHVVEE LNQVGGARRT
LERKLGREPE PREIAEELGM EVDRVLDLMA WGREHVSLDS PVDEDGDTSL GDLMAQETAP
GPDLNFIDVE SRDRLNSLVG KLDDRAADII RSRYGLVDGR QHKLADIGAK HGISAERVRQ
LEREALQKLR RLGDPDLAA
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