Gene Noca_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2933 
Symbol 
ID4597434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3111624 
End bp3113141 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content71% 
IMG OID639777538 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_924122 
Protein GI119717157 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1
[COG3301] Formate-dependent nitrite reductase, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGTACG GGTTCGCCAT CGACCAGCGC ACCTGCATCG GCTGCCACGC CTGCACGGTC 
GCCTGCAAGA CCGAGCACGA GGTGCCGCTC GGCCAGTTCC GCACCTGGGT GAAGTACGTC
GACGGCGGCA CCTTCCCCGA CACCACCCGC TCGTTCGGGG TGATGCGCTG CAACCACTGC
ACCGACGCCC CGTGCGTCAA GATCTGCCCC ACCCAGGCGT TGTTCAAGCG CGAGGACGGC
ATCGTCGACT TCGACAACGA GCGGTGCATC GGATGCAAGT CCTGCATGCA GGCCTGCCCG
TACGACGCCA TCTACATCGA CGCCGAGACG CACACCGCGG CCAAGTGCAA CATGTGTGCG
CACCGGGTCG ACGAGGGGCT CGAGCCCGCC TGTGTGGTCG TCTGCCCGAC CCACTCGATC
TGGGTCGGCG ACCTGGACGA CCCGTCGAGC GGCATCGCGA GGCTCGTCGC CACCCAGGAG
ACGGCCGTGC GCTCGCCGGA GCAGAACACC GGCCCCAACG TGTTCTACCT CGGTGCCGAC
CGGGCCGTCC TGGACCCGCT GGCGGCCCCC GTCGACGACA CCTACATCTG GGCGAAGCCG
GACGCCCAGC GACTGGCGAT CGCCGGCGAC GTCGACCGGG ACCCGGTCAC CGGCGCCCGC
ACCACGCTCA ACACCGCGCA CCCGCGCCCC TGGGGCTGGA AGGTCGTCAC CTACCTGTGG
ACCAAGGGCG TCGGGGCCGG CGCCCTCGGC CTCGCACTGC TGGCCCACCT GATGGGCATC
GGGCTGGGCC CCGTCGGCGA CTACGTCGCC CCGGTCCTGG GCCTGTTCGG CGCGGCGACG
ACCGGCGTGC TGCTCGTCTG GGACCTCAAG CGTCCCGAGC GGTTCCTCTA CATCTTCTTG
AAGTCGAACT GGACCTCCTG GCTGGTGATC GGCGCCTACG TCCTCACCGT GTTCTCCGGG
GGCGCGGTCT TGTGGATGCT CGCCGTCGCT CTCGACCTCG GCTGGGCGAT GACGACGCTG
GCCTGGGTCG GGCTCCCGGT GAGCGCCCTG ATGGCGGCCT ACACCGCGTT CCTCTTCGGC
CAGGCCGAGG GCCGGGACCT GTGGCAGTCG CCGCTGCTGT TCTGGCACCT GGTCGTCCAG
GCCGTGATGG TCGGCAGCGG CGCGCTGGCC GTCGCCGGGC TGTTCGCCGA CCTCTCGGAC
CCGGCCTGGG AGATGGTCAC GGTCGCGTTC GTGCTCTCGA CGGCCGCGCA CCTGCTCATG
CTCGGCGTCG AGTACGCCGG CGGGCACGCG AGCCGGCAGG CGACCGTCGC CGCGCACATC
GTCACCCGCG GCCGCTACGC TCGCCTGTTC TGGCTCGGCG CGGTGCTTCC GGCCGCTGCG
GCCGTGGTGC TCGGAGCCCT GACCTGGGGC GGGCTGCCCG TCGGCCTCCT GGTCGTGGCG
GGCATCGCCG TACAGCCGGC GCTGGTCGCC TACGAGAGCG CCTTCGTCCG CGCGGGCCAG
GACCCGCCGC TGTCATGA
 
Protein sequence
MQYGFAIDQR TCIGCHACTV ACKTEHEVPL GQFRTWVKYV DGGTFPDTTR SFGVMRCNHC 
TDAPCVKICP TQALFKREDG IVDFDNERCI GCKSCMQACP YDAIYIDAET HTAAKCNMCA
HRVDEGLEPA CVVVCPTHSI WVGDLDDPSS GIARLVATQE TAVRSPEQNT GPNVFYLGAD
RAVLDPLAAP VDDTYIWAKP DAQRLAIAGD VDRDPVTGAR TTLNTAHPRP WGWKVVTYLW
TKGVGAGALG LALLAHLMGI GLGPVGDYVA PVLGLFGAAT TGVLLVWDLK RPERFLYIFL
KSNWTSWLVI GAYVLTVFSG GAVLWMLAVA LDLGWAMTTL AWVGLPVSAL MAAYTAFLFG
QAEGRDLWQS PLLFWHLVVQ AVMVGSGALA VAGLFADLSD PAWEMVTVAF VLSTAAHLLM
LGVEYAGGHA SRQATVAAHI VTRGRYARLF WLGAVLPAAA AVVLGALTWG GLPVGLLVVA
GIAVQPALVA YESAFVRAGQ DPPLS