Gene Noca_2902 details

Gene Information

• Locus tag: Noca_2902
• ID: 4596351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 3085514
• End bp: 3087571
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639777507
• Product: putative transporter
• Protein accession: YP_924091
• Protein GI: 119717126
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0531] Amino acid transporters

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGGTCG TGAGTGTCGG CGACGTATCG AAGCGGATCC TGCTGGGGCG CAAGCTGCGC 
AGCTCCCAGC TGGGGGAGAC GCTCCTCCCC AAGCGGATCG CGCTACCAGT GTTCGCCAGC 
GACGCGCTGT CCTCGGTGGC CTACGCCCCG GACGAGGTCT TCATCATGCT GTCGCTGGCG 
GGCGCGTCGG CGTACGTCTG GTCGTGGAAG ATCGGCATCG CGGTCGCGCT GGTGATGGCG 
GCCGTGGTCG CGTCGTACCG GCAGACCGTG CACGCCTACC CCAGCGGCGG CGGCGACTAC 
GAGGTCGCGA CGGTCAACCT GGGCCCGACC GCCGGCACCA CCGTGGCCAG CGCGCTGTTG 
GTCGACTACG TGCTCACGGT CGCGGTGTCG ATCTCCTCGG GGGCCCAGTA CGCCGCGTCC 
GCCATCGACG CGCTCAGCGG CCACGAGGCC ACCTTCGCGA CCGCGATGGT GGTCCTGCTG 
ATGGCGATCA ACCTGCGCGG GATCCGGGAG TCGGGCACGT TCTTCGCGAT CCCGACCTAC 
GCGTTCATGG TCGCGATCCT CGGGATGTGC GGCTACGGGC TGCTCGAGCT GGCCGAGGGG 
CGGCTGCCGC AGGCGGCGAG CGCCGACCTG GACATGACCT CCGCGCCCGG CTACGGCGAC 
TCGATGACGA CCTTCGCGCT GCTGTTCCTC CTGGCGCGGG CCTTCTCCTC CGGCTGTGCG 
GCGCTGACCG GCGTCGAGGC GATCTCGAAC GGCGTGCCGG CGTTCCGCAG GCCGAAGAGC 
AGGAATGCGG CGACCACGCT GTTCCTGCTC GGCGCGATCG CGATCACGAT GATGATCAGC 
GTCATCGTGC TCGCCAAGCA GATGGGCCTC CAGCTGGTCG ACCCGAGCGA CGTGGACCGG 
CTCACCCGCA ACGGCGAGCC GCTGCCGGCC GGCTACGACC AGCACACGGT GATCGCCCAG 
ATCGCGGACG CCGTGTTCCA CGACTTCCCG GCCGGCTTCT ACCTGGTCGT GACCGTCACC 
GGCGTGATCC TGGTGCTGGC CGCGAACACC GCGTTCAACG GCTTCCCGGT GCTCGGGTCG 
ATCCTGGCCA AGGACGGGTA CGCCCCGCGG GCCCTCGGCG CCCGCGGCGA CCGGCTCGCC 
TACAGCAACG GCATCGTGTT CCTCGCCGTG ATGGCGATCG CCCTGATCCA GGTGTTCAAC 
GCCGAGACGA CCCGGCTGAT CCAGCTCTAC ATCGTCGGGG TGTTCGTCTC GTTCAACCTC 
AGCCAGCTCG GGATGATCCG GCACTGGACC AGGCACCTGC AGACCGAGCG GGACCCGGCG 
GTCCGCCGGC GGATGGTCCG CTCACGGACC ATCAACGCCA TCGGGCTCAC CTTCACCGCG 
GTCGTGCTGG TGGTCGTCCT GATCACCAAG TTCCTCGCCG GGGCGTGGAT CACGATCCTC 
GCGATGCTGT TCTTCTTCGC GGGGATGCGC GCGATCCGGC GCCACTACGA CAGCGTCAAC 
GACGAGCTGG CCGCCGACGA GGAGGACAAG GTCCTCCCGA CCCGGGTGCA CGCGATCGTG 
CTGGTCTCCA AGCTGCACAA GCCGACCCTG CGCGCGCTCG CGTTCGCCAA GGCGACCCGG 
CCCAACGTGC TCGAGGGCGT CTACGTCTCG GTCGACCAGG CGGCCACCAA CCGGCTGCTC 
GAGGAGTGGG ACGAGCGCAA CCTCGGCGTA CCCCTCAAGG TCCTGCACTC GCCCTACCGC 
GAGCTGGTCC GGCCGATCGT CGAGTACGCC ACCGAGATCC GCAGGGCGAA CCCGCGCGGC 
GTGGTCGCGG TCTACATCCC GGAGTACGTC GTGGGCCGCT GGTGGGAGCA GCTGCTGCAC 
AACCAGACGG CGCTGCGGCT CAAGGGCCGG CTGCTCTTCG CGCCCGGCGT CATGGTCACC 
TCGGTGCCCT ACCAGCTGCG CTCCTCGGAG CTGGCCCGGG AGCGGGAGGA GCGGATCGGC 
GTCTGGACCC GGCCCACCGA CTACCGGCTG GGTGACCCGC GGTCGCGGCA CGACTCGGAC 
CGGCAGATCC AGCCGTGA 

 

Protein sequence

MPVVSVGDVS KRILLGRKLR SSQLGETLLP KRIALPVFAS DALSSVAYAP DEVFIMLSLA 
GASAYVWSWK IGIAVALVMA AVVASYRQTV HAYPSGGGDY EVATVNLGPT AGTTVASALL 
VDYVLTVAVS ISSGAQYAAS AIDALSGHEA TFATAMVVLL MAINLRGIRE SGTFFAIPTY 
AFMVAILGMC GYGLLELAEG RLPQAASADL DMTSAPGYGD SMTTFALLFL LARAFSSGCA 
ALTGVEAISN GVPAFRRPKS RNAATTLFLL GAIAITMMIS VIVLAKQMGL QLVDPSDVDR 
LTRNGEPLPA GYDQHTVIAQ IADAVFHDFP AGFYLVVTVT GVILVLAANT AFNGFPVLGS 
ILAKDGYAPR ALGARGDRLA YSNGIVFLAV MAIALIQVFN AETTRLIQLY IVGVFVSFNL 
SQLGMIRHWT RHLQTERDPA VRRRMVRSRT INAIGLTFTA VVLVVVLITK FLAGAWITIL 
AMLFFFAGMR AIRRHYDSVN DELAADEEDK VLPTRVHAIV LVSKLHKPTL RALAFAKATR 
PNVLEGVYVS VDQAATNRLL EEWDERNLGV PLKVLHSPYR ELVRPIVEYA TEIRRANPRG 
VVAVYIPEYV VGRWWEQLLH NQTALRLKGR LLFAPGVMVT SVPYQLRSSE LAREREERIG 
VWTRPTDYRL GDPRSRHDSD RQIQP