| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2901 |
|---|
| Symbol | |
|---|
| ID | 4596350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3084276 |
|---|
| End bp | 3085517 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639777506 |
|---|
| Product | deoxyribonuclease |
|---|
| Protein accession | YP_924090 |
|---|
| Protein GI | 119717125 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGGC AGCCGCGACC GCGCAGGGCT CGCGGCGGCT CCCGCGTCGG CGAGCGGTTC
GAGGCCGTGG TCGGCCCGAT CGCGCATGGC GGGCACTGCA TCGTCCGGCT CGACGGCACG
GCGGACGGCC CCTCGGACCG GCCGCGGGTG GTGTTCGTGC GGCACGCGAT CCCGGGCGAG
CGCGTGGTCG TGGAGATCAC CGAGGGCACC GAGGGCGACC GGTTCTGGCG CGGCGATGCC
GTCGAGGTGC TCGAGGCGTC CCGGGACCGG GTCGAGCCGC CGTGCCCGTA CGCCGGCCCC
GGCCGCTGTG GTGGCTGCGA CTTCCAGCAC GTGGCGCTGC CGCGCCAGCG CGAGCTGAAG
GCGGCCGTGG TCCGCGAGCA GCTCGGCCGG CTCGCCCGGG CCGAGGTGCA CGTCGAGGTC
GAGCCGCTGC CGGCGGACTC CCCGGAGATG GAGGGCGGGC TGCGCTGGCG AACCCGGATC
CAGTGGGCGA TCGGGCCGCG CGGCCAACGG GGGCTGCGCA AGTACCGCTC CCGCGAGGTG
GTCTCGATCG ACGACTGCCT GATCACCCGG CCGGACGCCC GCGCGATCAG CCGGGCCGGC
ACCACCCTGG ACCGGCACGC GACCGCGCTG TCCACGGTCG TGGGGGAGCG GGTCGACGTG
CCGCGGCACG GCGGCGAGCA CGTCTTCGCC GTGGAGGCGG ACGGGTTCTG GCAGGTGCAC
CCGGGGGCGC CGCGGATCCT GGTCGAGACG GTCCTGGACC TGCTTCAGCC GCGGCGCGGC
GAGACCGCCC TGGACCTGTA CTCCGGGGTC GGGCTGTTCG CGCGCTACCT CGCCGAGGCC
GTCGGACCGA CCGGCCGGGT CCTGTCCGTC GAGGGCGACC GGACCGCCAG CAGGCACGCC
CGCGCCAACC TGGCCGGCCT CGAGGGGGTC GACGTCGAGT GCGGCGCGGT CGACCGGGTG
CTGGCCGACC CGCTGCCGCC GGCGTACTCC TCGGTCGACC TGGTCGTCCT CGACCCGCCC
CGCGAGGGCG CCCGCGCGCT CGTCGTCGAG CAGGTCGTCG AGCGCTCCCC GCGCGCCGTG
GCCTACGTCG CCTGCGACCC GGCCGCCCTG GCCCGCGACG TCGCGACGTT CCAGAAGTTC
GGCTACCACC TGCGCTCGCT GCGTGCCCTG GACATGTTCC CGATGACTTC ACATGTTGAG
GTCGTGGCGC AACTTGTGAA AAGCGGCTCT GGCCTGCGGT GA
|
|---|
| Protein sequence | MTRQPRPRRA RGGSRVGERF EAVVGPIAHG GHCIVRLDGT ADGPSDRPRV VFVRHAIPGE
RVVVEITEGT EGDRFWRGDA VEVLEASRDR VEPPCPYAGP GRCGGCDFQH VALPRQRELK
AAVVREQLGR LARAEVHVEV EPLPADSPEM EGGLRWRTRI QWAIGPRGQR GLRKYRSREV
VSIDDCLITR PDARAISRAG TTLDRHATAL STVVGERVDV PRHGGEHVFA VEADGFWQVH
PGAPRILVET VLDLLQPRRG ETALDLYSGV GLFARYLAEA VGPTGRVLSV EGDRTASRHA
RANLAGLEGV DVECGAVDRV LADPLPPAYS SVDLVVLDPP REGARALVVE QVVERSPRAV
AYVACDPAAL ARDVATFQKF GYHLRSLRAL DMFPMTSHVE VVAQLVKSGS GLR
|
|---|
| |