Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2873 |
Symbol | |
ID | 4598472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3050908 |
End bp | 3051423 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777478 |
Product | sigma-70 region 4 domain-containing protein |
Protein accession | YP_924062 |
Protein GI | 119717097 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.208469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGTCC GTGACGCGGA GCGGGAGTCC TTCGAGCAGT ACGTCGCCGC CCGCCGGGGC GCGCTGCTGC GCACGGCATA CCTGCTCACC GGGAACCGGG AGGACGCCGA GGACCTGGTC CAGGTGAGCC TCGTGAAGGT GGTGCCGCGC TGGGCGCGGA TCGCCGACGA CCCGGAGCCC TACGTGCGCA CGGTCCTGGT CCACGAGAGC GTCAGCCGGT GGCGCCGCCG CCGGTGGCGC GAGGTGCCCA CCGAGCACCT GCCCGAGACG ACCGTCAAGG GGCCGGACAC CGACCGGATG GCACTCCGGC AGGCGCTCGC GACGCTCGCG CCGCGACAGC GGGCGGTGAT CGTGCTGCGG TACTACGAGG ACCTCACCGA GAAGGAGACC GCGGCGGTGC TCGGGATCTC GGTCGGCACG GTGAAGTCCC AGGCACGCGA CGCCCTCGCC CGGTTGCGCG CGACTGCGCC GCACCTGGAC GACGAGCGGG AGGCGCTCAG GCCACCCGGA CGGTGA
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Protein sequence | MSVRDAERES FEQYVAARRG ALLRTAYLLT GNREDAEDLV QVSLVKVVPR WARIADDPEP YVRTVLVHES VSRWRRRRWR EVPTEHLPET TVKGPDTDRM ALRQALATLA PRQRAVIVLR YYEDLTEKET AAVLGISVGT VKSQARDALA RLRATAPHLD DEREALRPPG R
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