Gene Noca_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2873 
Symbol 
ID4598472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3050908 
End bp3051423 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content74% 
IMG OID639777478 
Productsigma-70 region 4 domain-containing protein 
Protein accessionYP_924062 
Protein GI119717097 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.208469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGTCC GTGACGCGGA GCGGGAGTCC TTCGAGCAGT ACGTCGCCGC CCGCCGGGGC 
GCGCTGCTGC GCACGGCATA CCTGCTCACC GGGAACCGGG AGGACGCCGA GGACCTGGTC
CAGGTGAGCC TCGTGAAGGT GGTGCCGCGC TGGGCGCGGA TCGCCGACGA CCCGGAGCCC
TACGTGCGCA CGGTCCTGGT CCACGAGAGC GTCAGCCGGT GGCGCCGCCG CCGGTGGCGC
GAGGTGCCCA CCGAGCACCT GCCCGAGACG ACCGTCAAGG GGCCGGACAC CGACCGGATG
GCACTCCGGC AGGCGCTCGC GACGCTCGCG CCGCGACAGC GGGCGGTGAT CGTGCTGCGG
TACTACGAGG ACCTCACCGA GAAGGAGACC GCGGCGGTGC TCGGGATCTC GGTCGGCACG
GTGAAGTCCC AGGCACGCGA CGCCCTCGCC CGGTTGCGCG CGACTGCGCC GCACCTGGAC
GACGAGCGGG AGGCGCTCAG GCCACCCGGA CGGTGA
 
Protein sequence
MSVRDAERES FEQYVAARRG ALLRTAYLLT GNREDAEDLV QVSLVKVVPR WARIADDPEP 
YVRTVLVHES VSRWRRRRWR EVPTEHLPET TVKGPDTDRM ALRQALATLA PRQRAVIVLR
YYEDLTEKET AAVLGISVGT VKSQARDALA RLRATAPHLD DEREALRPPG R