| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2854 |
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| Symbol | |
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| ID | 4598453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3024309 |
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| End bp | 3026399 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777459 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_924043 |
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| Protein GI | 119717078 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA ACGACACGAC GAGCGAGCTC GTCGCTCGCG CCCAGGAGAT CTCCTCCGAC
GCCGAGCGCG TCACCCAGGC CCACCTGCGC AAGGTCTCGC TGCCCTCGAC CTCGGGCCGC
AGCGGCGCGG TGCTCGGGCT GATCACCCTC GACAACGGCG AGGACCACAC CAAGCCGAAC
ACCTTCGGCC CGCGCTCGCT GCTCGCGCTG AACGAGGCGA TCGACACCGC CCTCGCGGAC
GACGAGATCG TCGCCCTCGG CGTGACCGGC AAGCCGTTCA TCCTGGCCGC GGGCGCCGAC
CTGACCTCGA TCTCGGGCGG CGGCCCGGAC GCCGTCCGCG TGGTGGCCGA GCTCGGCCAC
GCGGTGTTCC GCAAGCTCCA GGACGGCCGG AAGCCGTCGT TCGGGTTCGT CAACGGCCTG
GCGCTGGGCG GCGGCCTCGA GGTCGCGCTG CACTGCACCT ACCGGACCGT GATGGACAGC
GCCCCGGCGC TCGGCCTACC CGAAGTGATG CTCGGGCTGG TGCCCGGGTG GGGCGGCGCG
TTCCTGGTGC CGAACCTGCT CGGCGCCGAT CGGGCGGTCA CCGTGATCCT CGAGAACCCG
CTCAACAACG GCCGCACGCT CGGCGGTGCG GCAGCGTACG AGCTCGGCCT CGCCGACGCG
GTCTTCCAGG GCGCGGACTT CCTGGAGCAG TCGTTGCTCT GGGCGGACGC GGTGCTGCGC
GGCGAGATCG TCGTCGACCG TCCGGAGGTC GACCGTGGAG CCGCCTGGGA CGCCGCCGTC
GAGCGCGCCC GTGCTCTCGT GCAGGCCAAG ACGGGCGGCG CCAGCCCGGC CGCGCTCCAG
GCCGTCGAGC TCATCGACGC CGCCCGCGAC GGCGACCGCG ACGCCGGGTT CGCCCGCGAG
GACGACGCGC TCGAGGCGAT GTCGAGGACT CCCGAGCTGA TCGCCTCGCT GTACGCGTTC
GACCTGGTGC AGAAGCGCGC CAAGCGTCCT GCGGGCGCGC CGGACAAGGC GCTGGCGCGG
CCGGTGACCA AGGTCGGCAT CGTCGGCGCG GGGCTGATGG CCTCGCAGAT GGCGCTGCTG
TTCGTGCGTC GCCTCGAGGT GCCCGTCGTC CTCACCGACC TCGATCAGGA GCGGGTCGAC
AAGGGCGTCG GCTACGTCCA CGCCGAGATC GACAAGCTGC TCGCCAAGGG CCGGATCAGC
TCCGACCGGG CGAGCCGCCA CAAGGGCCTG GTCACCGGGT CGGTCGACAA GAGTGAGGGC
TTCGCCGGCG CCGACTTCGT CATCGAGGCG GTCTTCGAGG AGATGTCGGT CAAGAAGTCG
GTGTTCGCCG ACGTCGAGAA GGCCGTCTCG CCCGAGTGCA TCCTGGCGAC CAACACCTCC
TCGCTCTCGA TCACCGAGAT GGCGGCCGAC CTCGAGCACC CCGAGCGGGT CGTCGGCTTC
CACTTCTTCA ACCCGGTCGC GGTGATGCCG CTGCTGGAGA TCGTCAAGGG CGAGCGCACC
GACGACGCCA CGCTGGCCAC GGCGTTCGCG ACCGGCAAGG CCCTGAAGAA GACCACGATC
CTGGTCAAGG ACAGCCCGTC GTTCATCGTC AACCGGCTGC TCGGCAGGTT CATGGGCGAG
GTCGGGCGGA TCGTGGATGA GGGCACGCCC GTGCCGGTCG CCGACAGCGC GTTCGCCGGG
GTCGTGCCGA TGCCGCCGTT CATGCTCCTG TCGCTGGTGG GCCCGGCGAT CGCGCTGCAC
AACAACGAGA CGCTGCACGG CGCGTTCCCG GACCGGTTCT ACGTCTCCCC CGCGCTCGAG
CGCGTGGTGG CGGCGCGCAA GGTGTCGTAC TACGGTCCCG ACGGCGCGAT CGACCCCGAG
GTCGAGGCGC TGCTCGAGAC GCCGGCCGAG CCCGTGGTCC TCGAGCCCGC GCAGATCCGC
ACCCGGGTGC TGGCCGGGCT CGCCGACGAG GCCCGCCGGA TGCTCGACGA GGGCGTGGCC
GTCGCGGCCG AGGACCTCGA CCTGGCGATG ATCACCGGCG CCGGGTTCTC GTTCTGGAAC
GGCGGGCTGA CGATGCTGCT CGAGCGTGAG GGGCACGGCA CGTTCCACTG A
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| Protein sequence | MTTNDTTSEL VARAQEISSD AERVTQAHLR KVSLPSTSGR SGAVLGLITL DNGEDHTKPN
TFGPRSLLAL NEAIDTALAD DEIVALGVTG KPFILAAGAD LTSISGGGPD AVRVVAELGH
AVFRKLQDGR KPSFGFVNGL ALGGGLEVAL HCTYRTVMDS APALGLPEVM LGLVPGWGGA
FLVPNLLGAD RAVTVILENP LNNGRTLGGA AAYELGLADA VFQGADFLEQ SLLWADAVLR
GEIVVDRPEV DRGAAWDAAV ERARALVQAK TGGASPAALQ AVELIDAARD GDRDAGFARE
DDALEAMSRT PELIASLYAF DLVQKRAKRP AGAPDKALAR PVTKVGIVGA GLMASQMALL
FVRRLEVPVV LTDLDQERVD KGVGYVHAEI DKLLAKGRIS SDRASRHKGL VTGSVDKSEG
FAGADFVIEA VFEEMSVKKS VFADVEKAVS PECILATNTS SLSITEMAAD LEHPERVVGF
HFFNPVAVMP LLEIVKGERT DDATLATAFA TGKALKKTTI LVKDSPSFIV NRLLGRFMGE
VGRIVDEGTP VPVADSAFAG VVPMPPFMLL SLVGPAIALH NNETLHGAFP DRFYVSPALE
RVVAARKVSY YGPDGAIDPE VEALLETPAE PVVLEPAQIR TRVLAGLADE ARRMLDEGVA
VAAEDLDLAM ITGAGFSFWN GGLTMLLERE GHGTFH
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