| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2851 |
|---|
| Symbol | |
|---|
| ID | 4598450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 3021075 |
|---|
| End bp | 3021941 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639777456 |
|---|
| Product | palmitoyl-CoA hydrolase |
|---|
| Protein accession | YP_924040 |
|---|
| Protein GI | 119717075 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAGGA ACGCCGACGA GCTCGTCGCG CTGCTCGACC TCGAGCGCAT CGACGACAAC
CTCTTCCGGG GGCAGCAGAT GCCCTCGTCG CTGCCGCGCG TGTTCGGTGG CCAGGCCGCG
GCCCAGTCGC TCGTCGCGGC GACCCGCACC GTCGACCCGG CGTACGTCGT GCACTCGCTG
CACTCCTACT TCCTCCAGCC CGGAGACACC CAGGCGCCGA CGATCTACGA CGTCGAGAAC
CTCCGCGACG GCCGCTCGTT CGCGACCCGG CGGGTGCTCG CACGCCAGCA CGGGCGCCCG
ATCTACGCGC TGACCGCGAA CTTCCACCAG CCCGAGCCCG GGTTCGAGCA CCAGGACCGG
ATGCCCGCTG TGGTCGCGCC GGAGGAGGCG ATCGACGCGC GGGCGGCGGC CAAGGAGCTC
GACCCCGGCC GCGACACCTC GCACGACTCC GAGTGGGACG TGGTCGACTT CCGCTACGTC
GGCTCCGACG GCGACGGGCT GATCGAGCCC GACCCGCGGC ACCCGGCGCG GCAGCGGTTC
TGGCTGCGGG TCTCCTCGCC GCTGCCGGAC GACCCGGTCC AGCACGTCGC GGCGTTCACC
TACCTCTCCG ACATGACCTT GATGGGCGCG GCGCTCGCGC CGCACGGCGT CCGGGTCGGC
GGGCCCGAGA CGCTCGTGGC GTCCCTCGAC CACGCGGTGT GGTTCCACCG GCCGTTCCGC
GCCGACGAGT GGTGGCTCTA CGACCAGGTC TCGCCGTCCG CGTCGGGCGG CCGCGGGCTG
GTGCTGGCCC GGGTGTTCAC CCAGGACGGC ACCCTGGTCG CGAGCGTGGC CCAGGAGGCG
CTGATCCGCC GCAGGACGCG ATCGTGA
|
|---|
| Protein sequence | MPRNADELVA LLDLERIDDN LFRGQQMPSS LPRVFGGQAA AQSLVAATRT VDPAYVVHSL
HSYFLQPGDT QAPTIYDVEN LRDGRSFATR RVLARQHGRP IYALTANFHQ PEPGFEHQDR
MPAVVAPEEA IDARAAAKEL DPGRDTSHDS EWDVVDFRYV GSDGDGLIEP DPRHPARQRF
WLRVSSPLPD DPVQHVAAFT YLSDMTLMGA ALAPHGVRVG GPETLVASLD HAVWFHRPFR
ADEWWLYDQV SPSASGGRGL VLARVFTQDG TLVASVAQEA LIRRRTRS
|
|---|
| |