Gene Noca_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2825 
Symbol 
ID4596115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2995235 
End bp2996074 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID639777430 
Producthypothetical protein 
Protein accessionYP_924014 
Protein GI119717049 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCCA TCAGCGCGCT CGGCGGCTCC TTCTACCGGG GCCGGCGCGA CTCCCTCGAG 
CAGTACGGCG ACCAGCTGCT GTTCTACGTC AAGGCACTGT CCTGGACGCC GCGCGCGATC
CGGCGCTACC CGCGCGAGAT CGTCAACACC CTCGCCGAGG TCACCTTCGG CGCCGGCGGG
CTGAGCCTGA TCGCCGGCAC GGTCGGCGTG ATCGCGTTCC TCGCGTTCTT CGCCGGCACC
GAGGTCGGCA TCCAGGGCTA CGCCTCCCTG AGCCAGATCG GCGTCGCCAA GTTCAGCGCC
TTCATCTCGG CCTACTTCAA CACCCGCGAG GTGGCGCCGC TGGTCTCGGC GATCGCACTC
GCGGCCACCG TGGGCTGCGG CTACACGGCC CGGCTGGGCG CGATGCGGAT CTCCGAGGAG
ATCGACGCGC TCGAGGTGAT GGGGATCCCG TCGTTGCCGT TCCTCGTCAC CACCCGGATG
GTGGCCGCGT TCGTCGCCGT CATCCCGCTG TACGTCGTCG CCCTGAGCGC GTCGTACCTC
TCACCGCGGC TGATCACCAC GCTCGTGTAC GGGCAGTCAC CAGGCACCTA CGACCACTAC
TTCCTGCAGT TCCTGCCGCC GATCGACATG CTCTGGTCGT TCTTCAAGCT CCTGTTCCTC
GCGGCGGCGG TGATCCTGAT CCACTGCTAC TACGGCTACA CCGCCTCGGG CGGGCCCGCC
GGGGTCGGCA TGGCCGTCGG CCGGGCGATC CGCACCAGCA TCGTGACGAT CGTGGTCGCC
GACTTCTTCC TGAGCTTCGC GATCTGGGGC TCCACCACCA CCGTCCGGAT CACGGGGTAG
 
Protein sequence
MASISALGGS FYRGRRDSLE QYGDQLLFYV KALSWTPRAI RRYPREIVNT LAEVTFGAGG 
LSLIAGTVGV IAFLAFFAGT EVGIQGYASL SQIGVAKFSA FISAYFNTRE VAPLVSAIAL
AATVGCGYTA RLGAMRISEE IDALEVMGIP SLPFLVTTRM VAAFVAVIPL YVVALSASYL
SPRLITTLVY GQSPGTYDHY FLQFLPPIDM LWSFFKLLFL AAAVILIHCY YGYTASGGPA
GVGMAVGRAI RTSIVTIVVA DFFLSFAIWG STTTVRITG