| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2823 |
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| Symbol | |
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| ID | 4596113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2992832 |
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| End bp | 2993917 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639777428 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_924012 |
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| Protein GI | 119717047 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.314486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCA ACTCGACCAC GATCGCCGCC GGCATCAAGC TCGGGATCTT CACCGTGGTC
TCGATCCTGG TGACCGGCCT GCTCGCGGCC ATCATGGGCA ACGTCGGCTT CGGCGCGGGG
ACGACGTACC AGGCGGTCTT CAGCACCGCC TCGATGCTCG TGAAGGGCGA CGACGTCCGG
GTCGCCGGCG TCAGCGTCGG CGAGGTCAAG AAGGTCGAGC ACTACGACCG CAGCCAGGCC
CTGGTGACGT TCCGGGTGCA GTCCGACGTC CCGCTCACGA CGGCCTCCCG CGCCGAGATC
CGGTTCCTCA ACCTGGTCGG CGACCGCTAC CTCGCGCTCG AAGAGGGCGC CGACACCGAG
GCCCGGCCGC TGGAGTCCGG GGACACGATC CCGATCGACC GGACCAGGCC CGGGCTGGAC
CTGACCACGC TCTTCAACGG CTTCCAGCCG CTGTTCCAGG CCCTCAACCC CCAGCAGGTC
AACGACCTGA GCATGAACCT GGTGCAGGTC CTCCAGGGTG AGGGCGGCAC CGTCCAGGGG
CTGCTGCAGA AGACCGCGTC GCTGACCAAC ACCCTGGCCG ACCGCGACCG ACTGATCGGC
CAGGTCGTCG ACAACCTCGG CCAGACCCTG GCCACCGTGG ACGACCGGCA CCAGCAGCTC
AGCGACCTGG TGGTCGGCCT GAAGGACTGG ATGGCCGACC TGGCCCGTGA CCGCGGCACG
ATCGGCTCGT CGCTGCAGAA CATCTCCGAC CTCACGGTCG TGGTCGCCGA CCTCCTGCGG
CAGGGCCGCC CCCTGGTGAA GTCCGACGTC GCGAAGCTGC GCCGCCTGGC CGCGCTGCTC
AACGAGAAGA AGAACAGCGA CCAGCTCACC GAGCTGCTCG ACCGGCTGCC CGAGTCGATG
ACCGACCAGA CCCGGACCGG CACCTACGGC TCCTGGTACA GCTACTACAT CTGCGGGTTC
AGCGGCCGGA TCACGCTGCC GGCGGGCCTG GGCGAGCTGC CCGGGGTGCG CCAGCTGATG
GCCCAGCTGA ACAACCTCGA CTTCCACTCC ACGGCGCCAC GGTGCAACGG GGCGACGGCT
CCATGA
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| Protein sequence | MSRNSTTIAA GIKLGIFTVV SILVTGLLAA IMGNVGFGAG TTYQAVFSTA SMLVKGDDVR
VAGVSVGEVK KVEHYDRSQA LVTFRVQSDV PLTTASRAEI RFLNLVGDRY LALEEGADTE
ARPLESGDTI PIDRTRPGLD LTTLFNGFQP LFQALNPQQV NDLSMNLVQV LQGEGGTVQG
LLQKTASLTN TLADRDRLIG QVVDNLGQTL ATVDDRHQQL SDLVVGLKDW MADLARDRGT
IGSSLQNISD LTVVVADLLR QGRPLVKSDV AKLRRLAALL NEKKNSDQLT ELLDRLPESM
TDQTRTGTYG SWYSYYICGF SGRITLPAGL GELPGVRQLM AQLNNLDFHS TAPRCNGATA
P
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