| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2822 |
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| Symbol | |
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| ID | 4596112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2991846 |
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| End bp | 2992835 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639777427 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_924011 |
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| Protein GI | 119717046 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.883459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGAT ACAGCGACGC GCGGGTCCTC CGGATGGGGG CGATCACGGT GGTGGTGATG
CTCCTGGTGC TGGCGGCCGC CTTCAACCTG TCCCAGTTCC CCGGCTTCAA GGGCGGCACC
TACCGGGCGG AGTTCAGCGA CGCCAGCGGA CTGCACCGCG GCAACATGGT CCAGGTCGGC
GGCATCCGCG TCGGCCGGGT CCAGGACGTC TCGCTCGAGA ACAGCAATAC CGTGCTGGTG
ACCTTCGAGG TCGACCACGG TGTCGAGTTC GGCACCGACA GCCGGGCGTC GATCGAGGTC
CTCAACCTGC TGGGGGAGAA GTACCTCGAT CTCCAGCCCG CCGGCTCCGG CCAGCTCGGT
GAGGACGACG TGATCCCGGT CGGGCGCACC GAGTCGGCGT ACGACATCGT CGGCGTGTTC
GGCGACCTCA CCACCACCAC CGAGCGGATC GACACCGACC GGCTCAAGCG GGCGCTGGAC
GTGGTCGCGG ACACGACCAA CCAGGCGGCC CCCGAGATCC GGTCGAGCTT CCGCGGCATC
GCCCGGCTCT CCCGGACCGT GGCGTCGCGC GACGAGCAGA TCCAGGCGCT GCTGAAGAGC
TCGCAGGGTG TCAGCAAGGT GCTCGCCGAC CACAGCTTGG ACCTCGTGGA CCTGATGCAG
CACAGCGACC TGGTGTTCCG GGAGGTCCAG CGCCGCAAGC AGGCCGTGCA CCTGCTGCTG
GTCAGCGCGC GCAGCCTGGC CCGCCAGCTG CGCGGGGTCG CCGAGGACAA CCAGGCCCAG
ATCGCGCCGG CGCTGCAGGA GGTCGACGAC CTGCTCGCGC TGCTCAACGG CAAGGAGAAG
GAGCTGAAGT CGACGCTGGC CGCCCTCGGC CCCTACGTCT CGATCCTCGG CAACATCATC
GGGACCGGTC CCTGGTTCGA CGCCTACGCG TCGAACCTCG CCGCGATCCC GACCGGAGAG
TTCGTGCCCG GACCCCTGGA GGGCCAGTGA
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| Protein sequence | MTRYSDARVL RMGAITVVVM LLVLAAAFNL SQFPGFKGGT YRAEFSDASG LHRGNMVQVG
GIRVGRVQDV SLENSNTVLV TFEVDHGVEF GTDSRASIEV LNLLGEKYLD LQPAGSGQLG
EDDVIPVGRT ESAYDIVGVF GDLTTTTERI DTDRLKRALD VVADTTNQAA PEIRSSFRGI
ARLSRTVASR DEQIQALLKS SQGVSKVLAD HSLDLVDLMQ HSDLVFREVQ RRKQAVHLLL
VSARSLARQL RGVAEDNQAQ IAPALQEVDD LLALLNGKEK ELKSTLAALG PYVSILGNII
GTGPWFDAYA SNLAAIPTGE FVPGPLEGQ
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