| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2820 |
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| Symbol | |
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| ID | 4596110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2989328 |
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| End bp | 2990638 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639777425 |
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| Product | virulence factor Mce family protein |
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| Protein accession | YP_924009 |
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| Protein GI | 119717044 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.5665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCGCC TGCTGCGCAG CGGGGTGCTC CTCGTGGTGC TCGCCCTCCT CGCGGGTGCG
TGCAAGTTCG ACGGCGCCTA CGACCTGCCG CTGCCGGGCT CGCCGGTCGA CGCGGACCAC
TCCTACGAGG TGACCGCCGA GTTCGCCGAC ATCCTCAACG TGGTGCCGCG CTCGCCGGTG
ATGGTCGACG ACGTCACGGT CGGCGAGGTC ACCGACGTCG AGCGGGTGGG CTGGCACGCC
CGCATCACGC TGCGGATCCG TGACGACGTG AAGCTGCCGG ACAACGCGGT CGCCGACATC
CGGCAGGTCA GCCTGCTGGG GGAGAAGTAC GTCGCCCTGG AGGCGCCCGC CGGCACGGCC
GCGGAGGGCA CCCTGTCCGA CGGCGACAAC ATCCCGCTGG CCGACACCGG GCGCAACCCG
GAGGTCGAGG AGGTGCTCGG TGCGCTCTCC TTCCTGCTCA GCGGCGGTGG CGTGAGCCAG
CTGGGCACCA TCACCCACGA GCTCAACCAG GTCATGGACG GGCGCACCGA GCGGCTGCGT
CACCTGCTCG GCTCCCTCGA GAGCGTCGTG GCGGCGCTGG ACGACCAGAA GGCCGACATC
GTGACCGCGA TGGAGTCGCT CGACCACCTC ACCTCGACCC TCAACGCCGA GAAGAAGACG
GTCACCGACG CCCTCGACGT CGCCGGCCCC GCAGTCGAGG TGCTCGCCGC CCAACACGAC
GAGCTGATCG CGATGCTGCG CTCGCTCGAC CGACTCGGCG CCGTCGGCAC CCGGGTGATC
GGTCAGAGCA AGGCCGACAT CCTGGCCTCG CTCGACCACC TCCAGCCGAT CCTCCAACGC
CTCCACGACG CCGGTGACGA CCTCGCCCCC GGGCTGAACC TCCTGGTGAG CTTCCCGTTC
CCCAAGGAGG CCTCGGAGAT CGTCAAGGGC GACTACGCCA ACACCTCGAT CCGCGCCGAC
ATCAGCCTCG AGAACCTGCT GCCCGGCCAG TCCGGCGGCG GCATCCCCGG CATCCCCGAC
CCGAGCCAGC TGCTGAGCAC CGTCGAGAAG TGCCTGCGCA GCGGCGACCT CACCAGCCGG
TCCTGCCAGC AGGTGCTCGA CTCCGCGAAC CTGCTGAAGA AGCTGGTCGA GGACTGCAAG
AAGAAGAAGT ACGACGGCAA CCCGGTCTGC ACGATCATCG AGGCGCTGCC CGAGCTGCCG
GACCTCTCGG GGCTGGCGGG ACTGACCGGC GGCGTCCTCG GCGAGGCGCT AAGTAGCGGT
GAGCCAAGCC GGGCGCCGAG CCCCGCTGGC CTCTACGGGG GTGCACCATG A
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| Protein sequence | MIRLLRSGVL LVVLALLAGA CKFDGAYDLP LPGSPVDADH SYEVTAEFAD ILNVVPRSPV
MVDDVTVGEV TDVERVGWHA RITLRIRDDV KLPDNAVADI RQVSLLGEKY VALEAPAGTA
AEGTLSDGDN IPLADTGRNP EVEEVLGALS FLLSGGGVSQ LGTITHELNQ VMDGRTERLR
HLLGSLESVV AALDDQKADI VTAMESLDHL TSTLNAEKKT VTDALDVAGP AVEVLAAQHD
ELIAMLRSLD RLGAVGTRVI GQSKADILAS LDHLQPILQR LHDAGDDLAP GLNLLVSFPF
PKEASEIVKG DYANTSIRAD ISLENLLPGQ SGGGIPGIPD PSQLLSTVEK CLRSGDLTSR
SCQQVLDSAN LLKKLVEDCK KKKYDGNPVC TIIEALPELP DLSGLAGLTG GVLGEALSSG
EPSRAPSPAG LYGGAP
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