Gene Noca_2754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2754 
Symbol 
ID4598788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2925404 
End bp2926984 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content62% 
IMG OID639777360 
Producthypothetical protein 
Protein accessionYP_923944 
Protein GI119716979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTTCCT CGAGCCGACG GACCTTGGCT TTGAGCTCCT TGATCTCAGC GAGCTCCTCG 
CTGGTTGCGC CCTGGCGCTG GCCGCCGTCG ATCTGGGCCT GGACGACCCA CCGGCGCACG
GTCTCCTTCC CGAGGCCTTC GCGGCGTGCG ACGGACTCGG CGGCCGCGGT CAGCGACGGG
TACTCCGGCA GGTGCTCCAG CACCTGCCGC ACGCACCGCT CCTTGACTGC GGGATCGATC
TTCTTCGGCA TGGTTCGCAT CCTTCCAACT CAAAAGGATG CGGCATCAAA CCTGGGGCGC
TTCAGCGTGC TCGACATCTA CAGTCGCGCA CGTCGATTCT CGATGTATGT CGGCGCTGAC
GTCACCGACG GGTTCCCGGC GGCTGAGGAG GCGACCAAGG TCCAGACCAA TCTGTTCGCC
GCAGGGTTCC GCGACGGGGA ACGGATCACG GTCGGAGTCA GCTTGAAGGG TCGGGTGTGG
AGCTATCTCA TCGCCCGAAC GCTCCTCGAC TGGGTCGAAT GGTGTCAGGC CCTCGGCAAG
CGCCTTCTTG ACGAGTCCAT CGACGTGGTG GCGGTGAAGC GCAACTTCAT CAGGCCATTG
ATTCTGGATG CATGGCCGGA CAGTGTGCCG CTCGGAGCCG AGTGGCCAAC CGAACTGCTC
CTCTCGCCTC CGGCATCACT CAAGATCCGC ATCGGAGGCG CAGACGTTCC CCTAAGCGAG
GTCGAACTTA GCGTCGCCCC CGAACTGTCG GACGAGGGAT GCGTCCGAAT CACGTTGGCC
GCTGAAGAGC ACGCAGTGGA TTACGACATA GTCCTCGACT CGGACGGGAT GCGCGCTCGC
GCTGTATCGA CAGAGGCGGC GTTCTCCACA AGTCGCACTT CTGTACCTGG ATCCGAGTTC
CTCACACGGC ATTGCCCCAT TGTGCTTCTG GGCGGCGACG GTGTCGTCTC TCCACCAGGA
GTCCTGTATC GACCCAATCG GGACATCGAT CCGCTTGATC GAAGCGAGAT GACGCCAATC
TCATGGAGCG GCGTCGATCT GAACAAGGAG TCTCGGGGAG ACCTGAAGGT CCCAGGCACT
GTTCAAGGTC GCTCGCTTGA ACTGCTCCAG ACCCAAGACT GGGACCTCCT GATCGACGAC
GACGGCAAAG GCGAGATTGC CGACCTAGTC GCGCTTCGCG TCGAAGATGA CACCCTTCGA
GTCGTCCTCG TCCATTGCAA GTTCGCGCAC GGCGGGACCG TCGGGGCCCG GCTCTCGGAT
CTCTATGAGT TGTGCGGCCA GGCGCAGAAG AGTTCAGCTT GGCGGAGACA TCCCGAGAAC
ATGATTCGGA AGCTGTTGGC ACGAGAACGG CGGCGGGTCA GCCAAGGCAG GCCGAGTGGC
TTTGAAACAG GCGCCGCCAC CGACTTGCTT CGGCTCCTAG GGAACGTCCC CTCGCTTCAC
GTCATCATGG AGATCGTTCT GGCTCAGCCT GGACTCAGCC AGAGTCGCGC GAGCGCGCCC
CAGCTCGAAC TCCTAGCCGC AACGAAGACC TACGTACGCG AGACGAGCTC AGCACAGTTG
CGGATTCTGA CCAGCGACTA G
 
Protein sequence
MSSSSRRTLA LSSLISASSS LVAPWRWPPS IWAWTTHRRT VSFPRPSRRA TDSAAAVSDG 
YSGRCSSTCR THRSLTAGSI FFGMVRILPT QKDAASNLGR FSVLDIYSRA RRFSMYVGAD
VTDGFPAAEE ATKVQTNLFA AGFRDGERIT VGVSLKGRVW SYLIARTLLD WVEWCQALGK
RLLDESIDVV AVKRNFIRPL ILDAWPDSVP LGAEWPTELL LSPPASLKIR IGGADVPLSE
VELSVAPELS DEGCVRITLA AEEHAVDYDI VLDSDGMRAR AVSTEAAFST SRTSVPGSEF
LTRHCPIVLL GGDGVVSPPG VLYRPNRDID PLDRSEMTPI SWSGVDLNKE SRGDLKVPGT
VQGRSLELLQ TQDWDLLIDD DGKGEIADLV ALRVEDDTLR VVLVHCKFAH GGTVGARLSD
LYELCGQAQK SSAWRRHPEN MIRKLLARER RRVSQGRPSG FETGAATDLL RLLGNVPSLH
VIMEIVLAQP GLSQSRASAP QLELLAATKT YVRETSSAQL RILTSD