| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2720 |
|---|
| Symbol | |
|---|
| ID | 4597288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2891726 |
|---|
| End bp | 2893081 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639777326 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_923910 |
|---|
| Protein GI | 119716945 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCT GGCTGCTGCT GGCGGCGGCG CTGCTCCTCA TCGTCGCCTG CGGCGTGTTC
GTCGCGGCCG AGTTCTCCTT CGTCACCGTC GACCGCAGCC AGGTCGAGCG CGCCGCCGCG
GCGGGGGACA CCGGCGCGGG TGGCGTGCAG GCCGCGTTGC GCACGCTGTC CACCCAGCTC
TCCGGAGCCC AGGTCGGCAT CACCATCACC AACCTCGCCA TCGGCTACCT CGCCGAGCCG
GCGATCTCGG ACCTGATCGA CGGGCCCCTG CGCGGCCTCG GCACGCCGGA GCGTGCGATC
ACGCCGACGG CGATCGCGGT CGGCCTGACG CTCGGCACGA TCCTCACGAT GATCTTCGGC
GAGCTGGTGC CCAAGAACCT GGCGCTCGCC AAGCCGATGG CCGTGGCCCG GGCGACCCAG
CGCTTCCAAC GCGGGTTCAC GGCGCTGGCG CGCGGTCCCA TCCGGGTGCT CAACGGCTCG
GCCAACGCCG TCGTACGCCG GCTCGGCATC GAGCCCCAGG AGGAGCTGCG CTCGGCGCGC
AGCTCCACGG AGCTCGCCTC GCTGATCCAG CGCTCGGCCG ACCTCGGCAC GCTCGACCTG
GAGACCGCCG AGCTGATGGA GCGCTCGGTC GAGTTCGGCG CCCGCACCGC GGGCGAGATC
ATGACGCCGC GGGTGCGCTC GAGCAGCCTG GAGGCGAACG ACCGGGCCAA CGTGGTCATC
GAGCTGACCC GGGAGACCGG GCACTCGCGG TTCCCGGTCC TGGACGCCGA CGAGAACGTC
GTCGGCACGG TGCACGTCAA GAACGCCGTC GCCCTGCCCG TCTACGAGCG CGCGACCACG
AAGGTCAAGC ACCTGATGGC CAAGCCGATC GTGGTCCCCG ACTCGCTGCG CCTCGACCCG
CTGCTGGCGC TGCTGCGCGG GGACGGCTTC CAGCTCGCGG TCGTGATGGA CGAGTACGGC
GGCTTCGCAG GCATCGTGAC CCTGGAGGAC GTCGTCGAGG AGATCGTCGG GGACATCGCC
GACGAGCACG ACCGGCTCAG CGCCAACGCA CGGCTGCAGC GGGACGGGAC CTGGTCGCTC
TCCGGCCTGC TGCGCCCCGA CGAGGTCGAG GACATCACCG GCGTCCTGCT GCCCGACCAC
GAGGACTACG ACACGATCGC GGGGCTGGTC CTCCGGGTGC TCGGCCGGGT GCCCCGGGTC
GGCGACCTCG CGGAGGTGAG CGTCCCCGAC CGCTCCGACC CCGACGAGCC GCGCGAGCAG
CTCGCCGTCC TCACCGTGGA GCGGATGGAC GGGCTGCGGA TCGACCGGCT GACGCTGCGG
CTCCTCGACA CCCCGATCGG GGGGGCGGAG TCGTGA
|
|---|
| Protein sequence | MTAWLLLAAA LLLIVACGVF VAAEFSFVTV DRSQVERAAA AGDTGAGGVQ AALRTLSTQL
SGAQVGITIT NLAIGYLAEP AISDLIDGPL RGLGTPERAI TPTAIAVGLT LGTILTMIFG
ELVPKNLALA KPMAVARATQ RFQRGFTALA RGPIRVLNGS ANAVVRRLGI EPQEELRSAR
SSTELASLIQ RSADLGTLDL ETAELMERSV EFGARTAGEI MTPRVRSSSL EANDRANVVI
ELTRETGHSR FPVLDADENV VGTVHVKNAV ALPVYERATT KVKHLMAKPI VVPDSLRLDP
LLALLRGDGF QLAVVMDEYG GFAGIVTLED VVEEIVGDIA DEHDRLSANA RLQRDGTWSL
SGLLRPDEVE DITGVLLPDH EDYDTIAGLV LRVLGRVPRV GDLAEVSVPD RSDPDEPREQ
LAVLTVERMD GLRIDRLTLR LLDTPIGGAE S
|
|---|
| |