Gene Noca_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2719 
Symbol 
ID4597287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2890680 
End bp2891729 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID639777325 
Producthypothetical protein 
Protein accessionYP_923909 
Protein GI119716944 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.244319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAGCC TGACCGCCAT CGTGCTCGCC GTCTTCCTCC TGCTCGGCAA CGCGTTCTTC 
GTGGGCGCGG AGTTCGCGTT GGTCTCCGCG CGCCGCACGC AGCTCGAGCC GCGCGCCGAG
GCGGGCTCGC GGATGGCGCG GACCACGATC AAGGCGATGG AGAACATCTC CCTGGTGATC
GGCGTCAACC AGCTCGGCAT CACCGTCTGC TCGCTGGTGC TCGGTGCGGT CGGCGAGCCC
GCGGTCGCCC ACCTCGTGGA GCCGGTCCTG CACGCGGTGA ACGTGCCGGA GGGCTTCGTG
CACCCGGTGT CGTTCGTGCT CGCCCTGTCG CTGGTCGTCT ACCTGCACGT GGTGCTGGGG
GAGATGATCC CGAAGAACAT CGCCCTGGCG GGGCCGGACC GGGCCGCGCT CGTGCTGGGC
CCGCCGATCT GGGGGATCGT GACCGTGCTC CGGCCGGTCG TCGTGGTCAT CAACGCGATC
GCGGCCGGGG TGCTGCGCCT GATGGGTGCC CGGCTGACCA GCGAGGTGAG CTCGACGTAC
ACCCGCGAGG AGGTCGCCGC GCTGGTCGAG CAGTCACGCG GCGAGGGCCT CCTCGAGGCC
GACGAGTACG ACCGCCTCGC CGGGGCGCTG GGGTTCACCG AGAAGACCGT CGGTGCCGTC
CTGATGCCGC CGGACTCGCT CACCACGGTG CCGCGGGGCT CGACCGGCGC CGAGGTCGAG
GCGCTGTGCG CGTCGACCGG CTTCAGCCGG TTCCCGGTCG TGGGGGAGGA CGGCGGGCTG
CTCGGCTACC TGCACATCAA GGACGTCCTC GAGCCGGACG AGGCCCGCCG GGCCCGGCCG
GTCGAGGACA AGTGGATCCG GCCGTTCGCC CCGGTCAGCG CCGACGAGCC GCTGCACGGT
GCCCTCGAGA CCCTGCAGCG CCGGGGCGCG CACATGGCGC GGGTGGTCGA CGGCGGCGGG
CGGACCCTCG GGCTGGCCAC CCTCGAGGAC GTCATCGAGG AGCTCGTGGG CGAGATCCGC
GACGCCGCGC ACCTGGAGGA CCACCTCTGA
 
Protein sequence
MNSLTAIVLA VFLLLGNAFF VGAEFALVSA RRTQLEPRAE AGSRMARTTI KAMENISLVI 
GVNQLGITVC SLVLGAVGEP AVAHLVEPVL HAVNVPEGFV HPVSFVLALS LVVYLHVVLG
EMIPKNIALA GPDRAALVLG PPIWGIVTVL RPVVVVINAI AAGVLRLMGA RLTSEVSSTY
TREEVAALVE QSRGEGLLEA DEYDRLAGAL GFTEKTVGAV LMPPDSLTTV PRGSTGAEVE
ALCASTGFSR FPVVGEDGGL LGYLHIKDVL EPDEARRARP VEDKWIRPFA PVSADEPLHG
ALETLQRRGA HMARVVDGGG RTLGLATLED VIEELVGEIR DAAHLEDHL