| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2709 |
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| Symbol | |
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| ID | 4597277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 2881583 |
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| End bp | 2884498 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639777315 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_923899 |
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| Protein GI | 119716934 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.142199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACC ACCACCCTCT CGCCGACCTC GACGACGCGC TGCCGTTCGT CGACCGCCAC
ATCGGGCTGC GCCCCGGCGA CGTCGAGACG ATGCTCGCCC GGCTCGGCTT CGACTCGCTC
GACGCGCTGA TGGCCGCGGC GGTGCCCGGC GGCATCCGGG CCGCCGACGA GCTGGACCTG
CCGGCCCCGC TGAGCGAGGA GGCCACGGCG CGCGAGCTGC GGGCGATCGC CCAGGCCAAC
CGTCCGGGGG AGGCGATGAT CGGGCTCGGC TACCACGCCA CGACGACCCC GCCGGTGATC
CGGCGCAACG TGCTCGAGGA CCCGAGCTGG TACACCGCCT ACACCCCCTA CCAGCCCGAG
ATCTCCCAGG GCCGGCTCGA GGCGCTGCTG AACTTCCAGA CCGTCGTCGG CGACCTCACC
GGGCTGCCGA TCGCCAACGC CTCGCTGCTC GACGAGGGCA CGGCCGCGGC GGAGGCGATG
ACGCTGGTGC GCCGCGCCCA TCGGAACGCT GTCGGGCCGT TCGTGGTCGA CGCCGACGCG
CTGCCACAGT CCATCGAGGT GGTCCGCACC CGCGCCGCGG GGCTGGGCAT CGACGTCGTG
GTCGCCGACC TGACCGACGG CCTGCCGGCG GACGTGCTCG AGGGCGGGCT GTGCGGCGTG
CTCGTGCAGT ACCCCGGCGC GTCCGGCCGG GTGCTGGACC CCAGGCGCGT GATCGAGCAG
GCCCACGAGC AGGATGCGCT CGCCGTCGTG GCCGCCGACC TGCTCGCCCT CACCCTGCTC
GAGTCGCCCG GCGAGCTCGG GGCCGACGTG GTGGTCGGCT CGAGCCAGCG GTTCGGCGTC
CCGCTGTTCT ACGGCGGCCC GCATGCCGGG TTCATGTCGG TGGCCGCCGG CCTGGAGCGG
CACCTGCCCG GCCGCCTGGT CGGCGTCTCG GTGGACGCCG AGGGGCGCCC GGCGTACCGG
CTCGCCCTCC AGACCCGCGA GCAGCACATC CGCCGGGACA AGGCGACCTC CAACATCTGC
ACCGCCCAGG TGCTGCTCGC GGTGGTGGCG TCGATGTACG CCGTCTACCA CGGGCCGGAG
GGCCTGCGCG CGATCGCGAC CCGCGCGCAC CGCTACGCCG CGGTCCTCGC CGCGGCGCTC
GGCCAGGGCG GGTTCCCGGT ACGCCACGAG AGCTACTTCG ACACCCTCGT CGTGCAGGCG
ACCGGCCGGG CCGCCGCGGT CGTCGCAGCG GCCCGGGCGC TCGGCGTGCA GCTGCGGCTG
GTCGACGCCG ACCACGTGGG CATCAGCACC TCCGAGTGCA CGACCCGGTC CACGGTCGCC
AGCGTGCTCA AGGCGTTCGG CCTGGCGACC GGCCCGGCCG ACGGCTCGGT CGACCTGGAC
GCGGTGGACG CCGCGACCGG CGACGCCCTG CCGGAGGCCC TGCGCCGGAC CACGCCGTAC
CTGACCCACG AGGTGTTCAC CAGCTATCAC AGCGAGACCG CGATGCTGCG CTACCTGCGC
CGGCTCTCGG CGCGCGACTA CGCGCTGGAT CGTGGCATGA TCCCGCTCGG CTCCTGCACG
ATGAAGCTCA ACGCCACCAC CGAGATGGAG CCGATCTCGC TGCCCGGGTT CGCCGACCTG
CACCCGTTCG CGCCCGCCGA GGACGCCCAG GGCTACCGGC AGCTGGTCAC CGAGCTCGAG
GGCTGGCTCG CGGAGGTCAC CGGCTACGAC TCCGTCTCGA TCCAGCCGAA CGCCGGCTCC
CAGGGCGAGC TCGCCGGCCT GCTCGCGATC CGCGGCTACC ACCGTGCCAA CGGCGACGAG
GCCCGCAACG TGGTGCTGAT CCCGTCCTCC GCGCACGGCA CGAACGCCGC CTCGGCGGTG
CTCGCGGGGA TGCGGGTCGT GGTCGTGAAG TCGGGGCCGG GCGGCGAGGT CGACCTCGAC
GACCTGCGCG CTCAGTGTGC CGCCCACGCG GACGACCTCG CGGCGATCAT GGTGACCTAC
CCGTCGACGC ACGGCGCGTA CGAGGAGACC ATCACGGAGC TGTGCGAGAT CGTGCACGCC
CACGGCGGGC AGGTGTACGT CGACGGCGCG AACCTGAACG CCCTGCTGGG CTACGCCAAG
CCCGGCGAGT TCGGCGGCGA CGTCTCGCAC CTGAACCTGC ACAAGACCTT CTGCATCCCG
CACGGCGGCG GCGGTCCCGG GGTGGGGCCG GTCGCGGTGC GCGCCCACCT GGCGCCGTAC
CTGCCCTCGC ACGGGATGCA CCCGGACGAG ACCAAGCGCA CCGGCATCGG CCCGGTCAGC
GCCGCGCCGT ACGGCTCGGC GGGGATCCTG CCGATCTCGT GGGCCTACAT CCGGCTGATG
GGCGCGGCCG GCCTGACCCG GGCCACCGCG GCCGCCGTGC TGTCGGCGAA CTACGTCGCC
GCCCGGCTCG GCGAGCACTA CCCGGTGCTC TACCGCGGCC ACGGCGGGCT GGTCGCGCAC
GAGTGCATCC TGGACCTGCG CGGCCTGACG AAGGAGAGCG GCGTCACCGT CGACGACGTC
GCCAAGCGGC TGATCGACTA CGGCTTCCAC GCCCCGACGA TGTCCTTCCC GGTCGCCGGC
ACGCTGATGG TCGAGCCGAC GGAGTCCGAG GACCTCGGCG AGATCGACCG GTTCATCGAC
GCGATGATCG CGATCCGCGG CGAGATCGAC CGGGTCGGCG CGGGGGAGTG GACCCCCGAG
GACTCGCCGC TGCGCGGGGC GCCGCACACC TCGCGCGCGC TCGTCGGCGA GTGGGACCGT
CCGTACTCCC GTGAGCTCGC GGTCTTCCCG ACCGGCCTCA CCGGCCCCAA CGGCGTGGCC
GACAAGTACT GGCCGCCGGT GGCGCGGATC GACCAGGCGT ACGGCGACCG GCACCTGGTC
TGCTCCTGCC CGCCTGTGGA AGCCTTCGCC GAGTGA
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| Protein sequence | MSDHHPLADL DDALPFVDRH IGLRPGDVET MLARLGFDSL DALMAAAVPG GIRAADELDL
PAPLSEEATA RELRAIAQAN RPGEAMIGLG YHATTTPPVI RRNVLEDPSW YTAYTPYQPE
ISQGRLEALL NFQTVVGDLT GLPIANASLL DEGTAAAEAM TLVRRAHRNA VGPFVVDADA
LPQSIEVVRT RAAGLGIDVV VADLTDGLPA DVLEGGLCGV LVQYPGASGR VLDPRRVIEQ
AHEQDALAVV AADLLALTLL ESPGELGADV VVGSSQRFGV PLFYGGPHAG FMSVAAGLER
HLPGRLVGVS VDAEGRPAYR LALQTREQHI RRDKATSNIC TAQVLLAVVA SMYAVYHGPE
GLRAIATRAH RYAAVLAAAL GQGGFPVRHE SYFDTLVVQA TGRAAAVVAA ARALGVQLRL
VDADHVGIST SECTTRSTVA SVLKAFGLAT GPADGSVDLD AVDAATGDAL PEALRRTTPY
LTHEVFTSYH SETAMLRYLR RLSARDYALD RGMIPLGSCT MKLNATTEME PISLPGFADL
HPFAPAEDAQ GYRQLVTELE GWLAEVTGYD SVSIQPNAGS QGELAGLLAI RGYHRANGDE
ARNVVLIPSS AHGTNAASAV LAGMRVVVVK SGPGGEVDLD DLRAQCAAHA DDLAAIMVTY
PSTHGAYEET ITELCEIVHA HGGQVYVDGA NLNALLGYAK PGEFGGDVSH LNLHKTFCIP
HGGGGPGVGP VAVRAHLAPY LPSHGMHPDE TKRTGIGPVS AAPYGSAGIL PISWAYIRLM
GAAGLTRATA AAVLSANYVA ARLGEHYPVL YRGHGGLVAH ECILDLRGLT KESGVTVDDV
AKRLIDYGFH APTMSFPVAG TLMVEPTESE DLGEIDRFID AMIAIRGEID RVGAGEWTPE
DSPLRGAPHT SRALVGEWDR PYSRELAVFP TGLTGPNGVA DKYWPPVARI DQAYGDRHLV
CSCPPVEAFA E
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