Gene Noca_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2708 
Symbol 
ID4597276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2880242 
End bp2881495 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content75% 
IMG OID639777314 
Productbeta-lactamase 
Protein accessionYP_923898 
Protein GI119716933 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGACG GCGAGCCGGT GTGGTTCGGC TCGTACGGCG GCCCCGCGGT CCCGGATCAC 
GACCCGGCGG ACGTGCAGTA CCGGATCGGG TCGATCACCA AGACGATGAC CGCCGTGCTC
GTCCTCCAGC TGGTCCGCGA CGGCCGGCTC GGCCTGGACG AGCCCGCGTC GGCGGTGCTC
GACGAGAACG CCGGCCACCC GTATGCCGAC CGCACGCTGC GCACCCTGCT CGCGCACGGC
TCCGGGATGC AGTCCGAGCC GGTGGGCTCG TGGTGGGAGC GCACGCCGGG ATCCTCGTTC
GCCGAGCTGA TGGCCGCCAA CGACGGGTCC GGCGCGGTGT TCGGGGTCCA CGAGCGGTTC
CACTACTCCA ACCTGGGCTA CGCCGTCCTC GGCGAGGTCG CCGCCCGGGC GCTCGGGACC
ACCTGGTGGG ACGCCGTCCG CGACCGGATC CTGGCGCCGC TGGGGATGGC GCGCACGTCG
TACCTCCCCG AGGGCGCCGC GGCGCAGGGC TGGTCGGTCC ATCCCTACGA CGCCACGCTG
CTGGCCGAGC CGGCCACCGA CAACGGCGCG ATGGCCCCGG CCGGGCAGGT GTGGGCGACG
GTCACCGACC TCGCGACGTA CGCCGCGTTC CTGGCCGGCG GCCACCCCGA CGTGCTCTCC
GTCGCCGAGC TCGACCGGGC CTTCGCGCCC CAGGCCGGCA GCCCGGAGGA CGGGCTGCGT
TCGGCGCACG GGCTCGGCTT CCAGCTGTTC GCGGGCGGCT CGGGCACGCT GGCCGGGCAC
ACCGGCTCGA TGCCCGGTTT CCTCGCGACC TGCCTGGTCG ACCGGCGGCG GCGCACCGGT
GGCGTCGTCC TCGCGAACGC GACGACCGGG TTCTCGCCGG CCGAGGCCGT GATCGGGCTC
CTGGAGGAGC TCGAGCGCTG CGAACCGTCC CTGCCCGAGC CGTGGCGGCC CGCCGAGAGC
GTCCCGGCCG AGCTCGCCGG CGTCCCGGGC GTCTGGCACT GGGGCAACAC GCCGGTGGTG
TTCACGATGG CCGGCAGCGA GCTGGTGGCA CTGCGCAACG GCGTCGAGGC CTACCGGTTC
GGCCTGCGCG CCGGCCGGGT GGTCGGGCTG TCCGGCTACC ACGCCGGCGA GGAGCTGCGG
GTCGTGCGTC GATCCGATGG GTCGATCCGC TACCTGGAGG CCGCGACCTT CGTCTACACG
CGGGAGCCCT ACGACCCGGA GGCCCCCATC CCTGGGGGCG CTCCGGGTCG CTAG
 
Protein sequence
MRDGEPVWFG SYGGPAVPDH DPADVQYRIG SITKTMTAVL VLQLVRDGRL GLDEPASAVL 
DENAGHPYAD RTLRTLLAHG SGMQSEPVGS WWERTPGSSF AELMAANDGS GAVFGVHERF
HYSNLGYAVL GEVAARALGT TWWDAVRDRI LAPLGMARTS YLPEGAAAQG WSVHPYDATL
LAEPATDNGA MAPAGQVWAT VTDLATYAAF LAGGHPDVLS VAELDRAFAP QAGSPEDGLR
SAHGLGFQLF AGGSGTLAGH TGSMPGFLAT CLVDRRRRTG GVVLANATTG FSPAEAVIGL
LEELERCEPS LPEPWRPAES VPAELAGVPG VWHWGNTPVV FTMAGSELVA LRNGVEAYRF
GLRAGRVVGL SGYHAGEELR VVRRSDGSIR YLEAATFVYT REPYDPEAPI PGGAPGR