Gene Noca_2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2659 
Symbol 
ID4599938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp2829167 
End bp2830072 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID639777265 
Product5'-3' exonuclease 
Protein accessionYP_923849 
Protein GI119716884 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.154679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTCG ACTCCGCCTC CATGTACTTC CGGGCCTTCT TCGGGGTCCC GGAGATCCTG 
GCCCCGGACG GCACCCCGGT CAACGCCGTG CGCGGCCTCC TGGACTTCAT CGCCCGGCTG 
GTCGCCGACT ACCGGCCGAC CCACCTGGTC GCCTGCTGGG ACAACGACTG GCGCCCCCAG 
TGGCGGGTCG ACCTGCTGCC GTCGTACAAG GCGCACCGGG TCGAGGCCGA GCGCACCGGT 
GAGCCGGACG TCGAGGAGGT GCCCGGCCCG CTGGAGGTGC AGGTGCCGAT CATCCGCGAG 
GTGCTCGCGG CCTTCGGGAT CTGCGTGCTC GGGGCCGATG GCTACGAGGC CGACGACGTG 
ATCGGGTCGC TCGCCACCCA GGCGCGCCAG CCGGTCGACG TCGTGACCGG CGACCGGGAC 
CTGTTCCAGC TCGTCGACGA CGAGGCCGAC GTGCGCGTGC TGTACATCGC GCGGGGCGTG 
GGCAAGCACG AGCGGGTCAC GAACGACTGG GTGCGCACGA AGTACGGCAT CGACGCCCGG 
CAGTACGCCG ACTTCGCCAC CCTGCGTGGC GACGCCTCCG ACGGGCTGCC CGGTGTCGCC 
GGCGTCGGGG AGAAGACCGC CGCGACCCTG CTGGGTCGCT TCGGCGACAT GGCCGGCATC 
GTCGCGGCCG CGCTCGACCC CGACTCCGAC ATGGGGCCCG GCCCGCGGGG CAGGATCAAG 
GCCGCCGCGG CGTACCTCGA GGTCGCGCCG ACGGTGGTGG CCGTGGCCCG CGACCTCGAT 
CTCGGCCCGG CCGACACCCG CCTCCCCGAC CAGCCCCGGG ACCTCCCCCG CCTCGCCGAC 
CTCGGTCACC GCTGGGGCAT CGAGAGCCCC GTCCAGCGGC TGACCGACGC CCTCGCGGGT 
CGCTGA
 
Protein sequence
MLLDSASMYF RAFFGVPEIL APDGTPVNAV RGLLDFIARL VADYRPTHLV ACWDNDWRPQ 
WRVDLLPSYK AHRVEAERTG EPDVEEVPGP LEVQVPIIRE VLAAFGICVL GADGYEADDV 
IGSLATQARQ PVDVVTGDRD LFQLVDDEAD VRVLYIARGV GKHERVTNDW VRTKYGIDAR 
QYADFATLRG DASDGLPGVA GVGEKTAATL LGRFGDMAGI VAAALDPDSD MGPGPRGRIK 
AAAAYLEVAP TVVAVARDLD LGPADTRLPD QPRDLPRLAD LGHRWGIESP VQRLTDALAG 
R