| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2656 |
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| Symbol | |
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| ID | 4599935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2824229 |
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| End bp | 2827039 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639777262 |
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| Product | DSH domain-containing protein |
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| Protein accession | YP_923846 |
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| Protein GI | 119716881 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.294225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCG CCTCGGACGA CCGGAGCCCG TCCGAGCGGT ACGCGTCGTA CCGCACCAGC
CGCAAGCACC CCGTGCTCCG CGACTTCCGG TCCCTCTACG ACTTCCCCCT CGACGACTTC
CAGGTGCGCG GCTGCCAGGC GATCGAGGAG GGCCGCGGCG TCCTGGTGGC CGCCCCGACC
GGCTCCGGCA AGACGATCGT GGGCGAGTTC GCCATCCATC TCGCGCTCGA GACCGGACGC
AAGGCCTTCT ACACCACCCC GATCAAGGCG CTGTCGAACC AGAAGTACCA CGACCTGGTC
GCCCGCTACG GCCCCGACCG GGTCGGCCTG CTCACCGGCG ACAACGTCGT CAACGGCGAC
GCGCCGGTCG TGGTGATGAC CACCGAGGTG CTGCGCAACA TGCTGTACGC CGGCTCCCGC
ACGCTGCTCG GCCTCGGGTT CGTCGTCATG GACGAGGTGC ACTACCTCGC CGACCGGTCC
CGGGGCGCGG TCTGGGAAGA GGTCATCATC CACCTCCCCG AGTCCGTCTC CCTGGTCTCG
CTCTCGGCCA CCGTCTCCAA CGCCGAGGAG TTCGGCGAAT GGCTGGCGAC CGTCCGTGGT
GACACCACGA CGATCGTGGA GGAGCGCCGC CCGGTGCCGC TCTACCAGCA CGTGATGGTC
GGGCGCCGCC TGCTCGACCT GTTCGCGTCC TCGGACGTCG ACGCCGCCGC CGGGTTCGTC
AAGGAGGGCG CCCCGGTCAA CGACGAGCTG TTGAAGGTCG CCCGCGACGA CTGGGCCAGC
AGCCGGATCA AGGACCGGCG CAACCCGCGG GGCCGGTCCA AGCCGGGACA GAAGAACGTC
GGGAACGGCC GCCGGGTCTG GATCCCGAGC CGCCCGGACG TGATCGACCG CCTCGACCGC
GAGGGCCTGC TCCCCGCGAT CGTCTTCATC TTCAGCCGCG TGGGCTGCGA CGCGGCGGTG
ACCCAGTGCC TCAACGCCGG CGTGCGGCTG ACCACACCGG AGGAGCGGGA CACGATCTAC
GCCTATGTCG AGGAGGCCTG CAGCGACCTG CCCGCCGACG ACCTCCACGT CCTGGGCTAC
CACGACTTCC TCGACGGGCT GACCCGCGGC GTCGCGGCCC ACCACGCGGG CATGCTGCCC
GTCTTCAAGC AGTGCGTGGA GGAGCTGTTC GTCCGCGGCC TGTGCAAGGT GGTCTTCGCC
ACCGAGACGT TGGCGCTGGG CATCAACATG CCGGCCCGCA CCGTGGTGAT CGAGAAGCTC
ACCAAGTGGA ACGGCGAGAC GCACGCCGAC ATCACGCCGG GGGAGTACAC CCAGCTCACC
GGCCGCGCCG GCCGGCGAGG CCTCGACGTC GAGGGCCACG GCGTCGTGCT GTGGCAGCCC
GGGACGAACC CGCGCGAGCT CGCCGGGCTC GCCTCCACGC GCACCTACCC GCTCCGGTCG
TCGTTCCGGC CGTCGTACAA CATGGCGGTC AACTTGGTGC ACCAGTTCGG CCGGGAGCGC
TCCCGGGAGC TGCTGGAGCA GTCCTTCGCC CAGTTCCAGG CCGACAAGGC GGTCGTCGGG
CTGGCCCGCC AGCTGCGCAA GAGCGAGGAC GCCCTTGCCG GCTACCGGGA CGCGGCGACC
TGCCACCTCG GCGACTTCAT GGAGTACGCC GACCTCCGCC GCCGGATCGG CGAGGTCGAG
AAGGGCGCCA GCCGGGCCCG CCGCGCCGAC CAGCGCGAGG CCGCCATCGA GTCGCTGCGC
GCGCTCAAGC CCGGCGACGT GATCGAGGTG CCGACCGGGA AGTTCGCCGG CTTCGCGGTC
GTGGTCGACC CCGGCTGGTC GGCCGAGGGT CCGCGACCCT ACGTCGTCAC CGCGGACCGG
CAGGCCCGCC GGCTGGCGAT GATCGACTTC CCCACGCCGG TCACGGCGGT CGCCCGGGTG
AAGGTGCCGA AGACCTTCAA CGGCCGCAAC CCGCAGATGC GCCGAGACCT CGCCGCGGCG
CTGCGCTCCC GCACCCACGA CCTCACCCCG CCCCCGCCCG GCCGGGCCGG CGGCCGCCCC
GACCAGCTGC GCACCCACGC CGACGAGGAG ATCGCCGGCC TGCGCGCCGA GCTCAAGGCC
CACCCGTGCC ACGAGTGCCC GGACCGCGAG GACCACGCCC GCTGGGCGGA GCGGTACTTC
AAGCTCGACC GCGACGCCCA GACGCTGAAG CGCCGGGTCG AGCAGCGCAC CAACACCGTC
GCCCGCCAGT TCGACCGGGT CTGCGAGGTG CTGACCGCGC TCGGCTATCT CACCGGGGAC
GGAGCCGATG CCCAGGTCAC CGAGCGCGGC AGCCACCTGC GGCGGCTGTA CTCCGACATG
GACCTGCTCG CCGCGGAGTC GATGCGGCAC GGGCTCTGGG ACGCCCTCTC GCCCTCCGAG
CTGGCCGCGG CCCTCTCCGT CCTGGTGTTC GAGGCGCGGC GGCCCGACGA CGCCTCCTCG
CCCCGGATCC CCGGCGGCGC CGTCCGCGAG GTGGTCGGTG AGATGGTCCG GCTCTGGGGC
AGCCTCGAGG CGCTCGAGCG GGACCACAAG CTCGAGTTCC TGCGCCAGCC CGACCTCGGC
TTCGCGTGGG TCGCCTACCG CTGGGCCGAG GGCGATGACC TCGACGACGT ACTGGTCGTC
AGCGACCTCG CCGCCGGCGA CTTCGTCCGT TGGATGAAGC AGCTGGTGGA CCTGGCCGGT
CAGGTCGCCG ACGCCGCCGG GGCCTCGCCG CTGCGGGAGA CCGCCCGCGA GGTGGTGCGC
CGGTTGCGTC GGGGCGTGGT GGCCTACTCC TCCCTCGCCG ACGACGAGTG A
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| Protein sequence | MSSASDDRSP SERYASYRTS RKHPVLRDFR SLYDFPLDDF QVRGCQAIEE GRGVLVAAPT
GSGKTIVGEF AIHLALETGR KAFYTTPIKA LSNQKYHDLV ARYGPDRVGL LTGDNVVNGD
APVVVMTTEV LRNMLYAGSR TLLGLGFVVM DEVHYLADRS RGAVWEEVII HLPESVSLVS
LSATVSNAEE FGEWLATVRG DTTTIVEERR PVPLYQHVMV GRRLLDLFAS SDVDAAAGFV
KEGAPVNDEL LKVARDDWAS SRIKDRRNPR GRSKPGQKNV GNGRRVWIPS RPDVIDRLDR
EGLLPAIVFI FSRVGCDAAV TQCLNAGVRL TTPEERDTIY AYVEEACSDL PADDLHVLGY
HDFLDGLTRG VAAHHAGMLP VFKQCVEELF VRGLCKVVFA TETLALGINM PARTVVIEKL
TKWNGETHAD ITPGEYTQLT GRAGRRGLDV EGHGVVLWQP GTNPRELAGL ASTRTYPLRS
SFRPSYNMAV NLVHQFGRER SRELLEQSFA QFQADKAVVG LARQLRKSED ALAGYRDAAT
CHLGDFMEYA DLRRRIGEVE KGASRARRAD QREAAIESLR ALKPGDVIEV PTGKFAGFAV
VVDPGWSAEG PRPYVVTADR QARRLAMIDF PTPVTAVARV KVPKTFNGRN PQMRRDLAAA
LRSRTHDLTP PPPGRAGGRP DQLRTHADEE IAGLRAELKA HPCHECPDRE DHARWAERYF
KLDRDAQTLK RRVEQRTNTV ARQFDRVCEV LTALGYLTGD GADAQVTERG SHLRRLYSDM
DLLAAESMRH GLWDALSPSE LAAALSVLVF EARRPDDASS PRIPGGAVRE VVGEMVRLWG
SLEALERDHK LEFLRQPDLG FAWVAYRWAE GDDLDDVLVV SDLAAGDFVR WMKQLVDLAG
QVADAAGASP LRETAREVVR RLRRGVVAYS SLADDE
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