| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2631 |
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| Symbol | metH |
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| ID | 4599910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2798981 |
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| End bp | 2802715 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639777237 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_923821 |
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| Protein GI | 119716856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0960245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCTGGT CCCCCCAGCA GCGCCCCGAC CTGACCGACC AGCTGACGCG CGCTCTGGAG
CAGCGCATCC TGGTGCTCGA CGGCGCGATG GGTACGGCGA TCCAGCGGGA CCGACCCGAC
GAGGCGGGCT ATCGCGGCGA GCGGTTCGCC GACTGGCCCA GCGACCTCGT GGGCAACAAC
GACCTGCTGA CGATCACCCG GCCGGAGATC ATCGCGGGCA TCCACCGCGA GTACCTCCTC
GCCGGCGCCG ACATCATCGA GACGAACACG TTCAACGCCA ACGCGGTCTC ACTGTCCGAC
TACGGCATGC AGGAGCTGGC CTACGAGATC AACTACGAGG CGGCGCAGCT CGCCCGGCGC
GAGGTCGATG CGGTCAGCAC GCAGGAGCAT CCGCGCTACG TCGCCGGCGC ACTGGGCCCG
ACCACCCGCA CGGCCTCGAT CTCGCCCGAC GTCAACGACC CGGGCGCGCG CAACGTGACC
TACGACCAGC TGGTCGCGGC GTACCTCGAC GCGGCCCGCG GCCTCGTCGA CGGCGGTGCC
GACCTGCTCG TGATCGAGAC GATCTTCGAC ACCCTCAACG CGAAGGCCGC GATCTTCGCG
GTCGAGACGC TCTTCGCCGA GAACCAGCGC CGCTGGCCGG TCATCATCTC CGGCACGATC
ACCGACGCCT CGGGGCGCAC CCTCTCCGGT CAGGTCACCG AGGCGTTCTG GAACTCCGTG
CGCCACGCCC GGCCGCTGGC GGTCGGCCTC AACTGCGCGC TCGGCGCGAA GGAGATGCGG
CCCTACATCG CCGAGATCGC CCGGATCGCG GACACCTTCG TCTCCTGCTA CCCGAACGCG
GGCCTGCCCA ACGCCTTCGG CGAGTACGAC GAGGCCGCCG AGGAGACGGC CGCGATCATC
GAGGAGTTCG CCGCCAGCGG CTTCGTGAAC CTGGTCGGCG GCTGTTGCGG CACGACCCCT
GCCCACGTCG CGGCCATCGC GAAGGCGGTC GAGGGCAAGA CCCGGCGGCC CGTCCCCGAG
CTGACGCCGG CGCTGCGGCT GGCCGGCCTC GAGCCGTTCG CGGTGACCGA CAAGAGCCTG
TTCGTCAACG TGGGGGAGCG CACGAACATC ACGGGCTCGG CCCGGTTCCG CAAGCTGATC
AAGGACGGCG ACTACGACAC CGCGCTGAGC GTGGCCGCGC AGCAGGTGGA GAACGGCGCG
CAGGTCATCG ACATCAACAT GGACGAGGGC ATGATCGACG GGGTGGCGGC GATGGACCGC
TTCACCCGCC TGATCGCGAG CGAACCGGAC ATCAGTCGGG TCCCGGTGAT GGTCGACTCC
TCCAAGTGGG AGGTCATCCA GGCGGGCCTG AAGAACATCC AGGGCAAGCC GATCGTCAAC
TCGATCTCCA TGAAGGAGGG CGAGGACACG TTCCGCGAGC AGGCGCGGCT GTGCCGTCAG
TACGGCGCGG CCGCGGTCGT GATGGCCTTC GACGAGGACG GCCAGGCCGA CAACCTGGAG
CGGCGCAAGG CGATCTGCGA GCGCGCCTAC CGGATCCTGG TCGACGAGGT CGGCTTCCCG
CCCGAGGACA TCATCTTCGA CCCCAACGTG TTCGCCGTCG CGACCGGCAT CGAGGAGCAC
GCGTCGTACG GGCTGGACTT CATCGAGGCC ACCCGCTGGA TCAAGCAGAA CCTCCCGGGC
GCCAAGGTCT CGGGCGGCAT CTCCAACGTG AGCTTCTCCT TCCGCGGCAA CAACCCGGTC
CGCGAGGCGA TCCACGCCGT GTTCCTGTAC CACGCGATCG GCGCCGGGCT CGACATGGGC
ATCGTCAACG CGGGCGCGCT CGTCGTCTAC GACCAGGTCG AGCCCGAGCT GCGGGAGCGG
ATCGAGGACG TCATCTTGAA CCGGCGACCC GACGCCGCCG AGCGGCTCCT GGAGATCGCC
GAGGCCCACA ACCGGGCCGG CGAGACCACC GAGGCCGCCG CCGCCGAGGA GTGGCGCGCA
CTGCCGGTCG AGGAGCGGAT CACCCACGCG CTCGTCAAGG GCATCGACGC GCACGTCGAG
CCGGACACCG AGGAGCTGCG GCAGCTGATC GCCGCTCGCG GCGGACGCCC GATCGAGGTC
ATCGAGGGCC CGCTGATGGA CGGCATGAAC GTCGTCGGCG ACCTGTTCGG CGCCGGGAAG
ATGTTCCTGC CCCAGGTCGT GAAGTCGGCG CGCGTCATGA AGAAGGCGGT CGCCTACCTG
ATCCCCTTCA TCGAGCAGGA GAAGCTGGAC AACCCCGAGC TCGCGACGGC CAAGGAGACC
AACGGCACGA TCGTGATGGC AACGGTGAAG GGCGACGTCC ACGACATCGG CAAGAACATC
GTCGGCGTCG TGCTGCAGTG CAACAACTAC GAGGTCATCG ACCTCGGCGT GATGGTGCCC
ACCCAGAAGC TCCTGGACAC GGCCCTCGAG GTCGGCGCCG ACGCCGTCGG CGTCTCCGGC
CTGATCACCC CCTCGCTGGA CGAGATGGTC GGGGTGGCCG CCGAGATGCA GCGCCGGGGC
ATGGAGATCC CGCTGCTGGT CGGCGGCGCG ACCACCTCAC GGGCACACAC GGCCGTGAAG
GTCGACGGCA AGTACGACGG ACCCGTCGTC TGGGTCAAGG ACGCCTCGCG CTCGGTCCCG
ACCCTGGCGA CGCTGCTGAA CCCGGCGCAG CGTCCGCGGC TGATGGCCGA GATCAAGGAG
GACTACGACT CCCTGCGGGC CCGGCACGCC ACGAAGCACG ACCGCCCGAT GCTGACCCTC
GAGCAGGCCC GGGACAACCG CACCCCGATC GACTGGTCGA CGTACGCGCC CCCGGCGCCG
CGAACCCCGG GCATCCACGT CCTCGAGGAC TACGACCTCG CCGAGCTGCG CGACTTCATC
GACTGGCAGC CGTTCTTCAA CGCCTGGGAG CTGAAGGGGA AGTTCCCCGA CATCCTCAAC
AGTCCGACCA CCGGGGAGAC CGCACGCGGG CTGTACGACG ACGCGCAGGC GATGCTCGAC
CGGGTCATCG AGGAGAAGTG GCTGCGGGCC AATGCCGTGT TCGGGCTGTT CCCGGCGAAC
GCGGTCGGTG ACGACGTCGA GGTCTACACC GACGACTCGC GCACCGAGGT GCTGACCACG
CTGCACAACC TGCGCCAGCA GGGCGACCAC CGCGACGGCA TCCCCAACCG GTCCCTGGGG
GACTTCGTGG CGCCGCGGGC GACCGGGCTT CCCGACCACG TCGGGGCCTT CGCGGTCACC
GCCGGCCTCG GGGCGGAGGC CAGGATCCTG GAGTTCAAGG AGCAGCTCGA TGACTACTCC
GCGATCATGC TCGAGGCACT GGCCGACCGG CTCGCCGAGG CCTTCGCCGA GCGGTTGCAC
CAGCGGGTGC GCACCGAGTT CTGGGCCCAT GCTCCCGAGG AGGACCTCGA CAACCAGGCC
CTGATCGCGG AGCGGTACGA CGGCATCCGG CCCGCGCCCG GCTACCCCGC CTGCCCGGAG
CACACCGAGA AGCGCACCCT GTGGCGGCTG CTCGACGTGA CGGCGCGGAC CGGCATCGAG
CTGACCGACG GGATGGCGAT GTGGCCCGGC GCCGCCGTCT CCGGTTGGTA CTACAGCCAC
CCGCAGTCGC AGTACTTCGT GCTCGGCCGG ATCGGCCGTG ACCAGGTGGC CGACTACGCC
GAGCGGAAGG GCTGGACGCT CACGGAGGCC GAGCGGTGGC TCTCGCCCAA CCTCGGCTAC
GACCCGGATG ACTGA
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| Protein sequence | MSWSPQQRPD LTDQLTRALE QRILVLDGAM GTAIQRDRPD EAGYRGERFA DWPSDLVGNN
DLLTITRPEI IAGIHREYLL AGADIIETNT FNANAVSLSD YGMQELAYEI NYEAAQLARR
EVDAVSTQEH PRYVAGALGP TTRTASISPD VNDPGARNVT YDQLVAAYLD AARGLVDGGA
DLLVIETIFD TLNAKAAIFA VETLFAENQR RWPVIISGTI TDASGRTLSG QVTEAFWNSV
RHARPLAVGL NCALGAKEMR PYIAEIARIA DTFVSCYPNA GLPNAFGEYD EAAEETAAII
EEFAASGFVN LVGGCCGTTP AHVAAIAKAV EGKTRRPVPE LTPALRLAGL EPFAVTDKSL
FVNVGERTNI TGSARFRKLI KDGDYDTALS VAAQQVENGA QVIDINMDEG MIDGVAAMDR
FTRLIASEPD ISRVPVMVDS SKWEVIQAGL KNIQGKPIVN SISMKEGEDT FREQARLCRQ
YGAAAVVMAF DEDGQADNLE RRKAICERAY RILVDEVGFP PEDIIFDPNV FAVATGIEEH
ASYGLDFIEA TRWIKQNLPG AKVSGGISNV SFSFRGNNPV REAIHAVFLY HAIGAGLDMG
IVNAGALVVY DQVEPELRER IEDVILNRRP DAAERLLEIA EAHNRAGETT EAAAAEEWRA
LPVEERITHA LVKGIDAHVE PDTEELRQLI AARGGRPIEV IEGPLMDGMN VVGDLFGAGK
MFLPQVVKSA RVMKKAVAYL IPFIEQEKLD NPELATAKET NGTIVMATVK GDVHDIGKNI
VGVVLQCNNY EVIDLGVMVP TQKLLDTALE VGADAVGVSG LITPSLDEMV GVAAEMQRRG
MEIPLLVGGA TTSRAHTAVK VDGKYDGPVV WVKDASRSVP TLATLLNPAQ RPRLMAEIKE
DYDSLRARHA TKHDRPMLTL EQARDNRTPI DWSTYAPPAP RTPGIHVLED YDLAELRDFI
DWQPFFNAWE LKGKFPDILN SPTTGETARG LYDDAQAMLD RVIEEKWLRA NAVFGLFPAN
AVGDDVEVYT DDSRTEVLTT LHNLRQQGDH RDGIPNRSLG DFVAPRATGL PDHVGAFAVT
AGLGAEARIL EFKEQLDDYS AIMLEALADR LAEAFAERLH QRVRTEFWAH APEEDLDNQA
LIAERYDGIR PAPGYPACPE HTEKRTLWRL LDVTARTGIE LTDGMAMWPG AAVSGWYYSH
PQSQYFVLGR IGRDQVADYA ERKGWTLTEA ERWLSPNLGY DPDD
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