Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2618 |
Symbol | |
ID | 4596422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2786064 |
End bp | 2787896 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639777223 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_923808 |
Protein GI | 119716843 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCTCGA CGACCCCAAC GCACGACGAC ACACGTCCGG AGCCGGCCGC CTCGCTGGCG CGGATGTTCT ACGACCGGAT CGCGGCGACG CCCGATCAGG AAGCCTTCCG CTTCCCCGAC GGGGCGGGCT GGCGCTCGGT CACCTGGCGC CAGACCGGCG AGACGGTCCG AACCCTCGCC GCCGGCCTGC TGGCGCTCGG CATCCGGCCC GAGGAGCGGG TCGCGATCCT CAGCAACACC CGGGTCGAGT GGCTCGAGGC CGACCTCGCG ATCATGTGCG CCGGCGCCGC CACCACGACG GTGTACCCCA CGACCAGCGC GGACGACGTC GCCTTCATCC TCGGGGACAG CGGCTCACGG ATCGCGTTCG CCGAGGACGA CACCCAGGTC GCCAAGTTGC GGTCGCGGCG CGACCACCTG CCCGACCTGA TCCGGGTCGT CACCTTCGAC GGCCAGGCGG ACGGCGAGTG GGTGCTCAGC CTGCGGGACC TGGTCGCACT CGGAGCGCGG CACCTGGTCG AGCATCCCGG CGCCGTCGAC CAGGCGGTGG CCGCGATCGG GCCCGAGGAC CTGGCCACCC TCATCTACAC CTCGGGGACG ACCGGCCAGC CGAAGGGCGT CGAGCTGCCG CACCGGTGCT GGACCTACAT CGGCTCGGCG GCCGACCGGC TCGGCATCCT CTCCGCCGCG GACGTGCAGT TCCTGTGGCT GCCGTTGTCC CACTCGTTCG GCAAGATGCT GGAGGCGGTC CAGCTCCAGA TCGGGTTCCC GACCGCCGTG GACGGCCGCC TGGAGCGGAT CGTGGAGAAC CTGGCCGAGG TCCGGCCGAC GTTCATGGCC GGGCCACCAC GGATCTTCGA GAAGGTCCAC GCCAAGGTCG TGCAGACCGT CGAAGAGGAG GGCGGCGTGA AGCACCGCCT GTTCAACTGG GCCTTCCGGG TCGGGGACCG AGTGGCGCGG GCGCGGCTCG AGGGGCGGCG GCCCTCGACG TTCGACGCCG CCCAGCACGC CGTGGCGGAC CGGTTGGTGC TCGCCAAGAT CCGCGAGCGC CTGGGCGGTC GGATCCGGTT CCTGGTCTCC GGCAGCGCCG CGCTCTCACC CGACGTCGGG CGCTGGTTCC ACGCGGCCGA CCTGCTGGTG CTCGAGGGGT ACGGACTGAC CGAGACCAGC GCCGGCACGT GCATGGTGCT GCCGGACGAC GCCGTGTTCG GGGCCGTCGG CCGGCCCCTG GACGGCACCG AGCTGCGGAT CGCCTCCGAC GGCGAGATCT TCGTGCGCGG GCCGGGAGTG ATGCGTGGCT ACCACCACCT GCCCGAGGCG ACCGCCGAGG TGCTCAGCGC GGACGGCTGG CTCGCGACCG GCGACGTCGG CGAGCTCGAC CACCGGGGCC GGCTGCGGAT CACCGACCGC AAGAAGGACC TGATCAAGAC CTCGGGCGGC AAGTACATCG CGCCGCAGGC GATCGAGATC ATCTTCAAGG CGGTGTGCCC GCTCGCGAGC CAGATGCTCG TCCACGCCGA CGGTCGCAGC TACGCGACGG CACTGATCAC CCTCGACCCG GACGCGCTGG CCCAGTGGGG CCGGGCCCAG GGCATGCCGG TGACGGACTA CTCGGCCCTC GCGGCGAGCC CCGAGGTGCA CGGGTACGTC GCGGCGTGCG TCGAGGAGCT CAACGGCCGG CTCAACCGGT GGGAGACGAT CAAGCAGTTC CGGATCCTCG ACCACGACCT GAGCGTCGAG GGCGGCGAGC TCACCCCGAG CATGAAGGTG CGCCGGAAGG TCATCGAGAC GACGTACCAC GACCTGCTCG ACTCGATGTA CGTCCCGGCC TGA
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Protein sequence | MASTTPTHDD TRPEPAASLA RMFYDRIAAT PDQEAFRFPD GAGWRSVTWR QTGETVRTLA AGLLALGIRP EERVAILSNT RVEWLEADLA IMCAGAATTT VYPTTSADDV AFILGDSGSR IAFAEDDTQV AKLRSRRDHL PDLIRVVTFD GQADGEWVLS LRDLVALGAR HLVEHPGAVD QAVAAIGPED LATLIYTSGT TGQPKGVELP HRCWTYIGSA ADRLGILSAA DVQFLWLPLS HSFGKMLEAV QLQIGFPTAV DGRLERIVEN LAEVRPTFMA GPPRIFEKVH AKVVQTVEEE GGVKHRLFNW AFRVGDRVAR ARLEGRRPST FDAAQHAVAD RLVLAKIRER LGGRIRFLVS GSAALSPDVG RWFHAADLLV LEGYGLTETS AGTCMVLPDD AVFGAVGRPL DGTELRIASD GEIFVRGPGV MRGYHHLPEA TAEVLSADGW LATGDVGELD HRGRLRITDR KKDLIKTSGG KYIAPQAIEI IFKAVCPLAS QMLVHADGRS YATALITLDP DALAQWGRAQ GMPVTDYSAL AASPEVHGYV AACVEELNGR LNRWETIKQF RILDHDLSVE GGELTPSMKV RRKVIETTYH DLLDSMYVPA
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