Gene Noca_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2601 
Symbol 
ID4597149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2766846 
End bp2767649 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content74% 
IMG OID639777207 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_923792 
Protein GI119716827 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.220558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCC TGCTCGAGAT CACCGACCCG ACCGACCCGC GCCTCGCGGA CTACCGCGAC 
CTGCGCGACG TCGAGCTGCG CAAGCACCTC GAGGCCACCC ACGGGCTGTT CCTCGCCGAG
GGGGAGAAGG TGGTGCGCCG CTCGGTCGAG GCGGGCTTCA CCCCGCGCTC CTTCCTGATG
GCGCCGCGCT GGCTCGACGG CCTGGCCGAG GTCCTCGACC GCTCCGACGC GCCGTGCTAC
GTGGTCTCCG CGGCGCTCGC CGAGGAGGTC ACCGGGTTCC ACGTCCACCG CGGCGCCCTG
GCCTCCCTCG AGCGCCGACC GCTGCCATCG GTCGACTCCG TGCTGTCCGG CGCCCGGTCG
GTCCTGGTGC TCGAGGACAT CGTCGACCAC ACGAACATCG GCGCGATCTT CCGGTCCGGC
GCCGCCCTCG GGTTCGACGC CGTGCTGCTC GCGCCACGTT GCGCCGACCC GCTCTACCGA
CGCTCGATCA AGGTCGCGAT GGGCGCGGTG TTCGCGGTGC CGTGGACCCG GCTGCCGGAC
TGGTACGGCG CGCTCCCGGA GCTCTCCGCC GCCGGGTTCA CCACCGTGGC GCTCACCCTG
GCCACCGACG CCGTGCCGAT CGAGTCGGCC GTCGCCGGGC TGGACAAGGT CGCGCTCGTG
CTCGGCTCCG AGGGCCATGG GCTCTCGCCG CGCTGGGAGC AGGCCGCCGA CCGCCGGGCG
ATCATCCCGA TGCGCGAGGG CATCGATTCG CTCAACGTGG CCGCCGCCAC CGCCGTCGCC
TGCTACGTCA CTGCCCGCCG CTGA
 
Protein sequence
MATLLEITDP TDPRLADYRD LRDVELRKHL EATHGLFLAE GEKVVRRSVE AGFTPRSFLM 
APRWLDGLAE VLDRSDAPCY VVSAALAEEV TGFHVHRGAL ASLERRPLPS VDSVLSGARS
VLVLEDIVDH TNIGAIFRSG AALGFDAVLL APRCADPLYR RSIKVAMGAV FAVPWTRLPD
WYGALPELSA AGFTTVALTL ATDAVPIESA VAGLDKVALV LGSEGHGLSP RWEQAADRRA
IIPMREGIDS LNVAAATAVA CYVTARR