Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2601 |
Symbol | |
ID | 4597149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2766846 |
End bp | 2767649 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777207 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_923792 |
Protein GI | 119716827 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.220558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCC TGCTCGAGAT CACCGACCCG ACCGACCCGC GCCTCGCGGA CTACCGCGAC CTGCGCGACG TCGAGCTGCG CAAGCACCTC GAGGCCACCC ACGGGCTGTT CCTCGCCGAG GGGGAGAAGG TGGTGCGCCG CTCGGTCGAG GCGGGCTTCA CCCCGCGCTC CTTCCTGATG GCGCCGCGCT GGCTCGACGG CCTGGCCGAG GTCCTCGACC GCTCCGACGC GCCGTGCTAC GTGGTCTCCG CGGCGCTCGC CGAGGAGGTC ACCGGGTTCC ACGTCCACCG CGGCGCCCTG GCCTCCCTCG AGCGCCGACC GCTGCCATCG GTCGACTCCG TGCTGTCCGG CGCCCGGTCG GTCCTGGTGC TCGAGGACAT CGTCGACCAC ACGAACATCG GCGCGATCTT CCGGTCCGGC GCCGCCCTCG GGTTCGACGC CGTGCTGCTC GCGCCACGTT GCGCCGACCC GCTCTACCGA CGCTCGATCA AGGTCGCGAT GGGCGCGGTG TTCGCGGTGC CGTGGACCCG GCTGCCGGAC TGGTACGGCG CGCTCCCGGA GCTCTCCGCC GCCGGGTTCA CCACCGTGGC GCTCACCCTG GCCACCGACG CCGTGCCGAT CGAGTCGGCC GTCGCCGGGC TGGACAAGGT CGCGCTCGTG CTCGGCTCCG AGGGCCATGG GCTCTCGCCG CGCTGGGAGC AGGCCGCCGA CCGCCGGGCG ATCATCCCGA TGCGCGAGGG CATCGATTCG CTCAACGTGG CCGCCGCCAC CGCCGTCGCC TGCTACGTCA CTGCCCGCCG CTGA
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Protein sequence | MATLLEITDP TDPRLADYRD LRDVELRKHL EATHGLFLAE GEKVVRRSVE AGFTPRSFLM APRWLDGLAE VLDRSDAPCY VVSAALAEEV TGFHVHRGAL ASLERRPLPS VDSVLSGARS VLVLEDIVDH TNIGAIFRSG AALGFDAVLL APRCADPLYR RSIKVAMGAV FAVPWTRLPD WYGALPELSA AGFTTVALTL ATDAVPIESA VAGLDKVALV LGSEGHGLSP RWEQAADRRA IIPMREGIDS LNVAAATAVA CYVTARR
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