Gene Noca_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2600 
Symbol 
ID4597148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2765623 
End bp2766846 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content75% 
IMG OID639777206 
Producturoporphyrinogen-III C-methyltransferase 
Protein accessionYP_923791 
Protein GI119716826 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.177036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGT ACTCGACGTA CCCCTCGGGG CTGCGGCTGT CCGGACGCCG GGTCGTGGTG 
GTCGGCGGGG GGCAGGTGGC CCAGCGCCGC GTGCCGCACC TGATCGCAGC GGGCGCCGAC
GTGCACGTGG TCAGCCCGCA GGTGACGCCG GCGATCGAGG GCATGGTCGG CTCGGGCGAG
GTGACCTGGC ACGAACGCGG CTTTGCAGAC ACCGACCTCG ACGAGGCGTG GTACGTCGTC
GCCGCGACCG ACGACCACGC GGTGAACGAG CAGGTGTCGG ACGCGGCCGA GGCGCGGCGC
GTGTTCTGCG TGCGGTCCGA CGACGCCAGC CGCGCGAGCG CGTGGACGCC GGCGGTCGGG
CGGCACGCGG GCGTCACGGT CGCCGTGCTC GGCCAGCGCG AGCCGCGACG GTCGGCGGCG
GTGCGCGACG AGATCCTCGA GGGCCTGCGC GAGGGCACGA TCGTCGCCCG GCACCAGCGC
GACCGCAGCG CCGGCGTGGT CCTGGTGGGC GGGGGCCCGG GCGACCCCGA GCTGATGACC
GTGGCCGGCC GCAAGGCACT GGTCGAGGCG GACGTCGTGG TCGCCGACCG GCTGGCGCCG
CGCGAGCTGC TCGGCGAGCT GCCCGCCGAC GTCGAGCTGA TCGACGTCGC GAAGCTCCCC
CGGGGCCGGT CGGCCCTGCA GGAGGAGATC AACCGCGTCA TCATCGAGCG GGCCCGGGCG
GGCAAGCGGG TGGTCCGCTT CAAGGGCGGC GACAACTTCG TCTTCGGGCG CGGGTTCGAG
GAGGTCATCG CGTGCCGCGA GGCCGGCGTG CCGGTCACGG TCGTGCCGGG GCTGACCAGC
TCGATCGCCG TACCCGCGGT CGCCGGGATC CCGGTGACCC ACCGCGGGGT GGCGCACGAG
TTCACCATCG TGTCCGGGCA CCTGCCACCC GGACACCCGC AGTCGCAGGT CAACTGGACA
GCGCTCGGCG CGCTGCGCGG CACCGTCGTG CTGATGATGG CGGTCGAGAA CGCACCCCGG
ATCGCGACCG CACTCGTCGC GGGCGGCCGG GCGGGCTCGA CGCCGGTGGC CGTGGTCTGT
GAGGGCACGA TGCCGGGGGA GCGGACCGTC CTCGCGACCC TCGACACCCT GGCCACGCGT
CTGGAGGAGG AGTCCGTGCG GCCGCCCGCG GTCATCGTGG TGGGCGAGGT GGTCCGGGTG
GCCCATCCGC GACACTTTGC GTGA
 
Protein sequence
MDEYSTYPSG LRLSGRRVVV VGGGQVAQRR VPHLIAAGAD VHVVSPQVTP AIEGMVGSGE 
VTWHERGFAD TDLDEAWYVV AATDDHAVNE QVSDAAEARR VFCVRSDDAS RASAWTPAVG
RHAGVTVAVL GQREPRRSAA VRDEILEGLR EGTIVARHQR DRSAGVVLVG GGPGDPELMT
VAGRKALVEA DVVVADRLAP RELLGELPAD VELIDVAKLP RGRSALQEEI NRVIIERARA
GKRVVRFKGG DNFVFGRGFE EVIACREAGV PVTVVPGLTS SIAVPAVAGI PVTHRGVAHE
FTIVSGHLPP GHPQSQVNWT ALGALRGTVV LMMAVENAPR IATALVAGGR AGSTPVAVVC
EGTMPGERTV LATLDTLATR LEEESVRPPA VIVVGEVVRV AHPRHFA