Gene Noca_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2588 
Symbol 
ID4597136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2753307 
End bp2754053 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID639777194 
ProductGntR family transcriptional regulator 
Protein accessionYP_923779 
Protein GI119716814 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAGC CCGTGACTGC CTCCCCCGAC GATCGCCTGC CTGTCGCGGT GCTGCGTCCG 
GTGCGCGGAC ACCACGCGTT CGAGGCGTGC GTCGAGCAGC TGGCGACCGC GATCCGGCTG
GGTGTCTACC CGCTCGGCGC GACGCTGCCC GCGGAGCGTG ACCTCGCCGA GCAGCTGGCC
GTCTCGCGCG CGACGCTCCG CGAGGCGATG GCGGCGCTGC GCGAGGCGGG GCTGGTCGAG
ACCAAGCGCG GGCGCGGAGG TGGCACCGTC GTCACCCTCA AGGCCCGCTC CCCCAGCGGC
CGTCGGGCTG CGCGCCTCAC CGCGACCCAA CGCCGGGACT GGCTCGACGC GCTCGAGTTC
CGGCGGATCG TCGAGCCGGG CGCGGCGTAC CTCGCGGCCC GCACCGACCT GGACGCGTCC
GCACGCGACC GGCTGGAGGC TGCGCTCGCG GAGGTGACCG CCGCCAGGAA GCCCGCTGCG
CACCGCCAAG CGGACTCGCG GTTCCACCTG ACGGTCGCGT CCCTGGCCGA CTCGCCGCGA
GTGGTCGAGG CCGTGACGTC TGTGCAGGCC ACCCTGCACG AGATGCTGCT GGCGATCCCG
GTCCTGGGCA GGAACATCGC CCACTCGGAC CGGCAGCACG GTGCGCTGGT CAAGGCGATC
CTCACGGGGG ACGCCGATCG CGCCCGCCGA GTCATGGAAG AGCACTGCGA CGACACGGCC
GCGCTCCTGC GCGGCCTCGT GGGATAG
 
Protein sequence
MVEPVTASPD DRLPVAVLRP VRGHHAFEAC VEQLATAIRL GVYPLGATLP AERDLAEQLA 
VSRATLREAM AALREAGLVE TKRGRGGGTV VTLKARSPSG RRAARLTATQ RRDWLDALEF
RRIVEPGAAY LAARTDLDAS ARDRLEAALA EVTAARKPAA HRQADSRFHL TVASLADSPR
VVEAVTSVQA TLHEMLLAIP VLGRNIAHSD RQHGALVKAI LTGDADRARR VMEEHCDDTA
ALLRGLVG