Gene Noca_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2559 
Symbol 
ID4598416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2726684 
End bp2727613 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID639777165 
ProductABC transporter related 
Protein accessionYP_923750 
Protein GI119716785 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGAGA GCGTGATCGA GATCCGCGGC CTGGTGAAGG AGTTCGGGAG CCTGCGGGCG 
CTCGACGGCC TCGACCTCAC GGTCGAGCGC GGCGAGGTGC ACGGCTTCCT CGGACCGAAC
GGCGCCGGGA AGTCCACGAC CATCCGGGTG CTGCTCGGCC TGCTGCGCAA GGACGGGGGC
GAGGCCCGGC TGCTCGGCGG CGACCCGTGG CGTCAGACCG CCGAGCTTCA CGCCCGGCTC
GCCTACGTGC CCGGTGACGT CAACCTGTGG CCGAACCTGA CCGGCGGGGA GGTGATCGAC
CTGCTCGGGC GGCTCCGCGG CGGGCTCGAC GAGCGGCGCC GGGCCGACCT GCTCGAGCGC
TTCGACCTCG ACCCGACGAA GAAGGGCCGC AGCTACTCCA AGGGCAACCG GCAGAAGGTC
GCCCTGGTCG CCGCCCTCGC CTCCGACGTG GAGCTGCTGC TGCTCGACGA GCCGACCTCC
GGGCTGGACC CGTTGATGGA GGCCGTGTTC CGCGACTGCA TCGACGACTT CCGAAGCGAG
GGCCACTCGG TGCTGCTGTC GAGCCACATC CTCGCGGAGG TCGAGCACCT GTGCGACCGG
GTGAGCATCA TCCGGGCGGG TCGCTGCGTG GAGTCCGGTA CGTTGGCCGA GCTCCGGCAC
CTGACCCGTA CGTCGATCAC CGCCGATCTC GCCACCGTCC CCGCCGGTCT GCCCGACCTG
CCGGGCGTGC ACGACGTGGA CATCGACAAC CACCGGGTCC ATCTCGAGGT CGACACCACC
GAGCTCGACG CCGTCCTGGA CCTGCTGCAG ACCGGCGGGG TGCGCTCGCT GGAGAGCCAG
CCGCCGACCC TCGAGGACCT GTTCCTGCGC CACTACGGCG ACCACGTGAC GGCCGACCCC
ACGGACCCGG CGAGGGAGGA CCTGCGCTAG
 
Protein sequence
MTESVIEIRG LVKEFGSLRA LDGLDLTVER GEVHGFLGPN GAGKSTTIRV LLGLLRKDGG 
EARLLGGDPW RQTAELHARL AYVPGDVNLW PNLTGGEVID LLGRLRGGLD ERRRADLLER
FDLDPTKKGR SYSKGNRQKV ALVAALASDV ELLLLDEPTS GLDPLMEAVF RDCIDDFRSE
GHSVLLSSHI LAEVEHLCDR VSIIRAGRCV ESGTLAELRH LTRTSITADL ATVPAGLPDL
PGVHDVDIDN HRVHLEVDTT ELDAVLDLLQ TGGVRSLESQ PPTLEDLFLR HYGDHVTADP
TDPAREDLR