| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2553 |
|---|
| Symbol | |
|---|
| ID | 4598410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 2722603 |
|---|
| End bp | 2723364 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639777159 |
|---|
| Product | FeS assembly ATPase SufC |
|---|
| Protein accession | YP_923744 |
|---|
| Protein GI | 119716779 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC TCGAGATCAA GGACCTTCAG GTCTCGGTCC ACACCGAGGA CGGTCCCAAG
GAGATCCTCA AGGGCGTCAC GCTGACCATC AAGGCCGGCG AGACGCACGC GATCATGGGG
CCCAACGGGT CGGGCAAGTC CACGCTGGCC TACTCGATCG CCGGCCACCC GAAGTACACC
ATCACCGGCG GCAGCGTCAC CCTCGACGGC GAGGACCTGC TCGCGATGAC CGTCGACGAG
CGAGCCCGCG CGGGGCTCTT CCTGGCGATG CAGTACCCCG TCGAGGTGCC CGGCGTCTCG
GTCTCGAACT TCCTGCGTAC GGCCAAGACG GCGCTGGACG GCGAGGCGCC GAAGCTGCGC
ACCTGGGTCA AGGACGTGAA CAGCGCCCTG GCGAACCTGA ACCTGGACCC GTCGTTCGGC
ACCCGGTCGG TCAACGAGGG GTTCTCCGGC GGCGAGAAGA AGCGCCACGA GATCGCCCAG
CTCGAGCTGC TGAACCCGCA GGTCGCGATC CTCGACGAGA CCGACTCCGG CCTGGACATC
GACGCGCTGA AGGTCGTCTC CGAGGGCGTG AACCGGTTCC GCGCCCAGGA GGGCAAGGGC
GTCTTGCTGA TCACCCACTA CACGCGGATC CTGCGCTACA TCACCCCCGA CCAGGTCCAC
GTCTTCGTGG ACGGCAAGGT CGCGGAGTCC GGCGGCCCCG AGCTCGCCGA GCACCTTGAA
GCCCACGGCT ACGAGAAGTA CGTCGCTGGG GCGGCGGTCT GA
|
|---|
| Protein sequence | MSTLEIKDLQ VSVHTEDGPK EILKGVTLTI KAGETHAIMG PNGSGKSTLA YSIAGHPKYT
ITGGSVTLDG EDLLAMTVDE RARAGLFLAM QYPVEVPGVS VSNFLRTAKT ALDGEAPKLR
TWVKDVNSAL ANLNLDPSFG TRSVNEGFSG GEKKRHEIAQ LELLNPQVAI LDETDSGLDI
DALKVVSEGV NRFRAQEGKG VLLITHYTRI LRYITPDQVH VFVDGKVAES GGPELAEHLE
AHGYEKYVAG AAV
|
|---|
| |