| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2542 |
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| Symbol | |
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| ID | 4598399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2712282 |
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| End bp | 2713226 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639777148 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_923733 |
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| Protein GI | 119716768 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.988716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTACG TCGGCCAGTC GGCCTCTGCT GCCCAGCAGT CCGTGGCCGA ACGGGCGAGC
GTCAAGGACG TCCTGGCGGC GTACGTCGGG CTCACCAAGC CGCGGGTGAT CGAGCTCCTG
CTGCTCACCA CTGTCCCCGT GATGTTCTTC GCCGACCGCG GCATCCCCGA GCTCTGGCTG
GTGGTGGCGA CCGTCGTCGG CGGCGCGTTC TCGGCCGGGT CGGCGTCGGT GTTCAACTGC
GTCTACGACC GGGACATCGA CGAGCAGATG CGGCGGACCC GCCGCCGGGC CCTGCCGCGG
CACATCGTGT CGCCGGCCGC GGCCCTGGTG TTCGGGTTCG TGCTCGGGAT CCTGTCGACG
GTGATCCTGT ACGTCTGGGT GAACCCGCTC TCGGCGGCGC TGTCGGTGGC CGCGAACGCG
TTCTACGTGC TCGTGTACAC GATGCTGCTC AAGCGCCGGA CCACCCAGAA CATCGTCTGG
GGCGGCCTGG CCGGGTGCTT CCCCGCCCTG ATCGGCTGGA CGGCGGTCAC CGGGTCGCTG
TCCTGGGTGC CGGTCGTGCT GTTCGCCGTG GTCTTCTTCT GGACCCCGCC GCACACCTGG
GCGCTGGCGC TGCGCTACCG CGAGGACTAC GCGAACGTCG ACGTCCCGAT GCTCCCCGTG
GTCGCGCCGG CGCGCGAGGT CGGGCGCCAG GTGGTCATCT ACAGCTGGGT GATGGTCGCG
ACCTCGCTGC TGCTGTGGCC GGTCGCCGGC ACCGGGATCT TCTACCCCAT CGCCGCCGGC
GTCCTCGGTG CCGTCTTCCT GCTCGAGGCA CACCGGATGT GGGCCCGCTC CCGGGACACC
GAGAGCCTCT CGGTGATCCA GCCGATGCGG CTGTTCCACT CCTCGAACCT GTACCTCTCG
CTGCTGTTCG TCGCGGTCGC GCTCGACCCG CTGCTGGCCG GCTGA
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| Protein sequence | MTYVGQSASA AQQSVAERAS VKDVLAAYVG LTKPRVIELL LLTTVPVMFF ADRGIPELWL
VVATVVGGAF SAGSASVFNC VYDRDIDEQM RRTRRRALPR HIVSPAAALV FGFVLGILST
VILYVWVNPL SAALSVAANA FYVLVYTMLL KRRTTQNIVW GGLAGCFPAL IGWTAVTGSL
SWVPVVLFAV VFFWTPPHTW ALALRYREDY ANVDVPMLPV VAPAREVGRQ VVIYSWVMVA
TSLLLWPVAG TGIFYPIAAG VLGAVFLLEA HRMWARSRDT ESLSVIQPMR LFHSSNLYLS
LLFVAVALDP LLAG
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