Gene Noca_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2538 
Symbol 
ID4598395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2705595 
End bp2707145 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content70% 
IMG OID639777144 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_923729 
Protein GI119716764 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACGC CTCCGGGCTG GCACAACCCC CTCCGCGACC CGCGCGATCG TCGGCTGCCG 
CGGATCGCGG GGCCGAGCGG GATGGTGCTC TTCGGCGTCA CCGGCGACCT GTCCCGCAAG
AAGATCATGC CGGCGATCTA CGACCTCGCG AACCGCGGGC TGCTGCCGCC GGGCTTCAGC
CTGACCGGCT TCGCGCGCCG CGACTGGGCC GACCAGGACT TCGCGCAGAT CGTCCACGAC
TCGGTCAAGA CGCACGCCCG GACCGAGTTC CGCGAGGAGG TGTGGCGTCA GCTCGCGGAA
GGCTTCCGCT TCGTGCCGGG CAACTTCGAC GACGACATGG CCTTCGAGCG GCTGCGCCGG
ACCATCGAGG AGCTCGACGA GGTGCGCGGC ACCGGCGGCA ACCACGCGTT CTACCTGGCC
ATCCCGCCGG GGTTCTTCGC CGATGTCGTG GGTCAGCTCC AGGAGCACGG GCTGACCGAG
GGCCGCGGCG ACTCCTGGCG TCGGGTGGTC GTGGAGAAGC CCTTCGGTCA CGACCTGGAG
TCCGCGCAGC GGCTCAACTC GGTGCTGGCC GAGGTGTTCC CCTCCGGCTC GATCTTCCGG
ATCGACCACT ACCTCGGCAA GGAGACGGTG CAGAACATCC TGGCGCTGCG GTTCGCCAAC
GAGATGTTCG AGCCGATCTG GAACTCCAAC TACGTCGACC ACGTCCAGAT CACGATGGCC
GAGGACATCG GCATCGGCGG GCGCGCCGGC TACTACGACG GCATCGGCGC GGCACGGGAC
GTGATCCAGA ACCACCTCCT CCAGCTGATG GCGCTCGTGG CCATGGAGGA GCCGACGTCC
TTCGACGCCG AGAGCCTGCG CATCGAGAAG CAGAAGGTCC TCTCCAGCGT CGTGCTGCCG
CGCCGGCTCG ACCTGACCAC CGCACGCGGT CAGTACGCCG CCGGCTGGGC GGGCGGCGAG
CAGGTGATCG GCTTCCTCGA GGAGGAGGGC ATCAAGCGGA CCTCCACCAC CGAGACCTAC
GCCGCGGTGA CCCTCCACGT GGACACCCGG CGGTGGGCCG GCGTCCCGTT CTACCTCCGC
ACCGGCAAGC GGCTGGGCCG GCGGGTGACC GAAGTGGCCG TGGTCTTCAG GCGGGCGCCG
CACCTGCCGT TCGCCGCCTC CTCGACCGAG GAGCTCACCC AGAACGCCCT CGTGATCCGG
GTGCAGCCCG ACGAGGGCGT GACGATGCGC TTCGGCTCGA AGGTGCCCGG CACCCAGATG
GAGATCCGCG ACGTCAACAT GGACTTCGTG TACGGCGGGG CCTTCACCGA GTCCTCTCCC
GAGGCCTACG AGCGCCTCAT CCTCGACGTG CTCCTCGGCG ACCCGCCGCT CTTCCCCCGC
CACGAGGAGG TGGAGCTGTC CTGGAGGATC CTCGATCCGA TCCTCGAGCA CTGGGCCCGC
CAGGACGAGC AGCACAAGAG CAGGCCCGAG CAGTACGAGT CCGGTGGCTG GGGCCCGGAG
TCCGCGAATG CGATGCTCGC CCGCGACGGA CGGGTGTGGA GACGACCATG A
 
Protein sequence
MTTPPGWHNP LRDPRDRRLP RIAGPSGMVL FGVTGDLSRK KIMPAIYDLA NRGLLPPGFS 
LTGFARRDWA DQDFAQIVHD SVKTHARTEF REEVWRQLAE GFRFVPGNFD DDMAFERLRR
TIEELDEVRG TGGNHAFYLA IPPGFFADVV GQLQEHGLTE GRGDSWRRVV VEKPFGHDLE
SAQRLNSVLA EVFPSGSIFR IDHYLGKETV QNILALRFAN EMFEPIWNSN YVDHVQITMA
EDIGIGGRAG YYDGIGAARD VIQNHLLQLM ALVAMEEPTS FDAESLRIEK QKVLSSVVLP
RRLDLTTARG QYAAGWAGGE QVIGFLEEEG IKRTSTTETY AAVTLHVDTR RWAGVPFYLR
TGKRLGRRVT EVAVVFRRAP HLPFAASSTE ELTQNALVIR VQPDEGVTMR FGSKVPGTQM
EIRDVNMDFV YGGAFTESSP EAYERLILDV LLGDPPLFPR HEEVELSWRI LDPILEHWAR
QDEQHKSRPE QYESGGWGPE SANAMLARDG RVWRRP