Gene Noca_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2508 
Symbol 
ID4597839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2675402 
End bp2676154 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID639777114 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_923699 
Protein GI119716734 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.168106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGAC TGGAAGGTCG CGTCGCGATC GTCACCGGCG CGGCGAGCGG CATCGGCAAG 
GTGACCGCCC AGCGGCTCGC CGAGGAGGGC GCGGCGGTGC TGGTCACCGA CATCCAGGTC
GAGGCCGGCG AGGCCACGGT CAAGGAGCTC GAGGAGGCCG GCGGGCGCGC CGCGTTCATG
CGGCACGACG TCACGAGTGA GGCCGACTGG GAGGCCGCGT TCGCCAAGGC GGCCGAGGAG
TTCGGAGGTG TCGACATCCT CGTCAACAAC GCGGGCATGG GTGACATCAA GCCGATCGAG
GAGACCACCC TGGCCGAGTG GGACCGCACG GTCGCCATCG ACCAGACCGG TGTCTTCCTG
GGCATGAAGA TCGGCGCGCC GTACCTCAAG CGCTCGGAGC ACGCCTCGGT CGTCAACATC
AGCTCGATCT TCGGCACCAG CGGTGGCTTC GGCGTCTCAC CGGCCTACCA CGCCGCCAAG
GGTGCGGTGC GCACGCTGAC GAAGAACGTC GCGCTGCACT GGGCGACCGA GGGTGTCCGG
GTCAACTCCA TCCACCCCGG CTTCATCGCC ACGCCGATCC TCGAGCAGTC CCGCGACACC
CCGATCTGGG ACGGCATGGT GCAGCTGACG CCGATGGCCC GCCTGGGCCG CCCCGAGGAC
ATCGCGGCCG GCGTGGCCTA CCTGGCCAGC GACGACGCCG CGTTCGTCAC CGGGCTCGAG
CTCTACATCG ACGGCGGCTA CATGGCCCGC TGA
 
Protein sequence
MRRLEGRVAI VTGAASGIGK VTAQRLAEEG AAVLVTDIQV EAGEATVKEL EEAGGRAAFM 
RHDVTSEADW EAAFAKAAEE FGGVDILVNN AGMGDIKPIE ETTLAEWDRT VAIDQTGVFL
GMKIGAPYLK RSEHASVVNI SSIFGTSGGF GVSPAYHAAK GAVRTLTKNV ALHWATEGVR
VNSIHPGFIA TPILEQSRDT PIWDGMVQLT PMARLGRPED IAAGVAYLAS DDAAFVTGLE
LYIDGGYMAR