Gene Noca_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2483 
Symbol 
ID4597108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2650433 
End bp2651617 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content76% 
IMG OID639777088 
Producthypothetical protein 
Protein accessionYP_923674 
Protein GI119716709 
COG category[S] Function unknown 
COG ID[COG4825] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.471903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCGG TCATGAGGAT GCCCGTACGA CAACGCCCGA CGGCCGGCCG CCCCGGCGTC 
GTCGGCACCG CTCGCGTCGA CCGTCGGATC CGCGCCCTGC TGCCGCGGCT GCACGCCGGC
GACGTGGCCG TGCTCGACCA CGCCGACCTC GACCGGACGA CCGCCCAGGC CCTGGTGGAC
GCCGGTGTCG TCGCCGTCGT CAACGCCGCG CCGATGATCT CCGGTCGCTA CCCGAGCCTC
GGCCCCGAGG TGCTGGCCAC CGCGGGGATC GTGATCGTCG ACCGGGTGGG CAGCACCGGC
CTGGCCGCCA TCACCGACGG CGAAGTGGTC CGGGTCGACG GAGGATCGGT CCTCGTGGCG
GACCGGCCGG TCGCCGTCGG CCGGCAGGTG GACGGCGAGA CCGTTGCCCG GGAGCTCACG
TCGGCCCGGG AGGGCCTGAC CGCGCACCTC GAGACGTTCA CCCACAACAC CACCGAGTTC
CTGCGGCGCG AGCAGGACCT GCTCCTGCAC GGCCTCGGGG TGCCCCGGCT GGCGACCCGG
GTGGCGGGCC AGCCGGTCGT CGTGGTCGCA GCCGGGCACG AGCACGCCCG CGAGCTGGCA
CTGGTCCGCA CCTTCGTGCG CGAGCAGCAG CCGGTCCTCG TGGCGGTCGG CCGCGGCGCC
GACGTGCTGC GTGCGGCGGG CCTGCGCGCG GACGTGGTGG TGCTCGACGC CGGGGCCGAC
GACGGCGATA CCCCGGCCGC GAAGGCGCTC AAGGCCGCCC GCGACGTGGT CGTGCGCACC
GACCGTGGCG CCGGCCGCTC CGCGGTCGAC CAGCTCGAGC GTCTCGGGGT GCGGCCGCTG
CGCTTCGAGT CGGGCGCGAC CCCCGAGGAC GCCGCGCTGC TGCTGGTGGC CGCGGCCGAT
GCGGCGCTGA TCGTCGGGGT CGGACTGCGA GCCAGCCTCG AGGAGCTCCT GGACAGCCAG
CGCGCCGGCT TGGCCAGCAC GTACCTGACC CGCCTCAAGG TCGGGCAGCG GCTCGTGGAC
GCTGCCGCCG TACCCCATCT GTACGCGGGG CGCGTGCGCC CCCGGCACCT GCTCCTGGTG
ATGCTCTCCG GGCTGATCGC CCTCGGCGCG GCCGTCGGCG TCACGCCGGT GGGCCAGGAG
TGGGCCGATG CCCTGGCCCA GACCCTGCAA GGACTGCTCC CGTGA
 
Protein sequence
MDAVMRMPVR QRPTAGRPGV VGTARVDRRI RALLPRLHAG DVAVLDHADL DRTTAQALVD 
AGVVAVVNAA PMISGRYPSL GPEVLATAGI VIVDRVGSTG LAAITDGEVV RVDGGSVLVA
DRPVAVGRQV DGETVARELT SAREGLTAHL ETFTHNTTEF LRREQDLLLH GLGVPRLATR
VAGQPVVVVA AGHEHARELA LVRTFVREQQ PVLVAVGRGA DVLRAAGLRA DVVVLDAGAD
DGDTPAAKAL KAARDVVVRT DRGAGRSAVD QLERLGVRPL RFESGATPED AALLLVAAAD
AALIVGVGLR ASLEELLDSQ RAGLASTYLT RLKVGQRLVD AAAVPHLYAG RVRPRHLLLV
MLSGLIALGA AVGVTPVGQE WADALAQTLQ GLLP