Gene Noca_2450 details

Gene Information

• Locus tag: Noca_2450
• ID: 4599791
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 2612460
• End bp: 2612945
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639777052
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_923641
• Protein GI: 119716676
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGGAC ACGGAGCACC TGCCCCGGCG CCCGTCGACT GCAGTGACCT GCGGGTCGCC 
GTCGTCGCCG CCAGCTGGCA CACGCAGGTG ATGGACGGCC TGATCGCGGG CGCGCAGCGC 
GCGCTGGCGG ACTACCACGT CGCGGAGCAC CGGCTGGTCC GCGTGCCGGG CGCCTTCGAG 
CTCGCGGTGG TCGCCGACGC CCTCGCCCGC CAGCACTACG ACGTGGTCGT GGCGTTGGGC 
GTGGTCATCC GCGGCGGCAC GCCGCACTTC GACTACGTCT GCCAGGCGGT GACCGAGGGT 
CTGGTCCGGG TCGCGCTCGA CCGTAGTCTC CCGGTCGGCT TCGGCGTCCT CACCTGCGAC 
GGCGACCAGC AGGCGCTCGA CCGCGCCGGC CTGGAGGGCT CGAAGGAGGA CAAGGGCTAC 
GAGGCCACGT CCGCTGCGCT GCTCACCGCC CGGACCCTGA AGGAGCTCGG GACCACCGCC 
CCGTAG 

 

Protein sequence

MSGHGAPAPA PVDCSDLRVA VVAASWHTQV MDGLIAGAQR ALADYHVAEH RLVRVPGAFE 
LAVVADALAR QHYDVVVALG VVIRGGTPHF DYVCQAVTEG LVRVALDRSL PVGFGVLTCD 
GDQQALDRAG LEGSKEDKGY EATSAALLTA RTLKELGTTA P