Gene Noca_2447 details

Gene Information

• Locus tag: Noca_2447
• ID: 4599788
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 2609486
• End bp: 2610523
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 639777049
• Product: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
• Protein accession: YP_923638
• Protein GI: 119716673
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGCGTG CGCTCGAGCT CGCGGCGGCT CCCGGCGTCC CGCTCGGACC CAACCCGCGC 
GTCGGCTGCG TGCTGCTCGA CGAGGACGGC CGCACCGTGG CGGAGGGCCA CCACCGCGGC 
GCGGGCACGG CGCACGCCGA GGCCGACGCG CTGGCGCGGG CCGGCGTCCG GGCCAGGGGA 
GCGACCGCAG TCGTCACCCT CGAGCCGTGC AACCACACCG GACGCACCGG CCCCTGCGCG 
CAGGCCCTGA TCGGCGCCGG CGTACGCCGG GTGGTCTTCG CCCAGCCCGA CCCGAACCCG 
GCCGCCGCCG GCGGCGCGGA CACCCTGCGC GCCGCCGGTG TCGACGTCGA GTCGGGACTC 
CTGCACGTCG AGTCGGGACT TCTGAACCGG TTCTGGGCCT TCGGGCTCGC GCACGGCCGG 
CCCTTCGTCA CCTGGAAGTT CGCCACCACG CTGGACGGCC GCAGCGCCGC CGCCGACGGG 
ACCAGCCGCT GGGTCAGCTC GCGCGCCGCC CGGCTCGACA CGCACCGGCT CCGGGCCCGG 
TGCGACGTGA TGCTCGTGGG CACCAACACC ATCGAGGTCG ACGACCCGCT GCTGACCGTG 
CGCGACGAGC ACGACCGCCC GCTGGAGCAC CAGCCGCTGC GGGCGGTGAT GGGGGAGCGC 
GACCTGGACC CGGGCCGCCG GGTCTTCGAC CAGCGACCGG CGAACGGTGC CGAGAGCGTT 
CACCTGCGCA CGCGCGACCC CGAGAAGGCC CTTGCCGAGC TGGCCGCTCT CGACCGGCAG 
CACGTGTTCC TCGAGGGCGG GCCGACGCTG GCCGCCGCCT TCCTGAAGGC CGGGCTGGTC 
GACGAGATCG TCGCGTACGT CGCCCCGATG CTGCTCGGGT CCGGCCGCGC GGCTGTCGGC 
GACCTCGGAA TCCCCACCAT CGCGCAGGCG TTCCGTCCGC GGGTCACCGA CGTCACGGTG 
CTCGAGGGGC TCGACGGCGA GCAGCCGAAC GTGCGCCTGA CCCTCACCCC TTCAGAACCC 
CGCGCAGAAG GAGCCTGA 

 

Protein sequence

MRRALELAAA PGVPLGPNPR VGCVLLDEDG RTVAEGHHRG AGTAHAEADA LARAGVRARG 
ATAVVTLEPC NHTGRTGPCA QALIGAGVRR VVFAQPDPNP AAAGGADTLR AAGVDVESGL 
LHVESGLLNR FWAFGLAHGR PFVTWKFATT LDGRSAAADG TSRWVSSRAA RLDTHRLRAR 
CDVMLVGTNT IEVDDPLLTV RDEHDRPLEH QPLRAVMGER DLDPGRRVFD QRPANGAESV 
HLRTRDPEKA LAELAALDRQ HVFLEGGPTL AAAFLKAGLV DEIVAYVAPM LLGSGRAAVG 
DLGIPTIAQA FRPRVTDVTV LEGLDGEQPN VRLTLTPSEP RAEGA