| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2445 |
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| Symbol | |
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| ID | 4599786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2607448 |
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| End bp | 2608428 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639777047 |
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| Product | putative DNA ligase (ATP), C-terminal |
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| Protein accession | YP_923636 |
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| Protein GI | 119716671 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.858354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCT CGAAGACGCC CGCGGTCGAG ATCGAGGTCG ACGACCGGGT CGTGCGGATC
AGCAACCCCG ACCGGGTGTA CTTCCCCGAC AGCGGAGCGA CCAAGCTCGA CCTGGTCGAG
TACTACCTCG CGGTCGGTCC GGGCATCGTC AACGCCCTGT TCGAGCGGCC GTGCATGCTG
CACCGCTTCC CGAAGGGCCT GGCGGGGGAG AAGGTGCACC AGAAACGGCT GCCGAAGGGC
GCACCGCCCT GGGTGGAGAC GGTCCGCCTG CACTTCCCGC GCTGGAACCG TACGGCGGAC
GAGCTCTGCG TCACCGAGCT GGGCAGCGTG ATCTGGGCGG TGCAGATGTC CACGGTCGAG
TTCCATCCCT GGAACAGCCG CCGCGAGGAC ACCGAGCGGC CGGACGAGTG GCGCATCGAC
CTCGACCCCG GCCCGGAGTG CTCCTACGAC CGGGTCCGGC GGGTGGCCCA CGTCGCCCAC
GAGGTCCTCG ACGAGCTCGG CGTCGTCGGC TTCCCGAAGA CCAGTGGCAG CAAGGGACTG
CACGTGTACG TCCGGATCCG CCCGGACCAT GGGTTCAAGG AGGTACGCCG GGCCGCGCTC
GCCTTCGCCC GCGAGGTCGA GCGCCGGGCG CCCGAGGACG TGGACCTGAC CTGGTGGCGC
AAGGACCGGG ACCCCGCGAC GGTCTTCGTC GACTACAACC AGAACGCCCG TGACCACACC
ATCGCGGCGG CGTACTCCGT CCGCGGCCTC CCCGACGCCC GGGTCTCCAC GCCCATCCGG
TGGGACGAGG TCGACGACGC CGACCCGCGT GACTTCACGA TCTTCACGGT GCCCGAGCGG
TTCGCCCGGC TCGGCGACCT GCACACCGAT ATCGACGACG GCGGCGGCCG GGGGCCGTTC
GACATCGCGT CGCTCCTGGA GTGGGCCGAC CGCGACGAGC GCGACGGCGC CGCCGGTCCC
GACGACGAGC AGTCCGAATA G
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| Protein sequence | MPASKTPAVE IEVDDRVVRI SNPDRVYFPD SGATKLDLVE YYLAVGPGIV NALFERPCML
HRFPKGLAGE KVHQKRLPKG APPWVETVRL HFPRWNRTAD ELCVTELGSV IWAVQMSTVE
FHPWNSRRED TERPDEWRID LDPGPECSYD RVRRVAHVAH EVLDELGVVG FPKTSGSKGL
HVYVRIRPDH GFKEVRRAAL AFAREVERRA PEDVDLTWWR KDRDPATVFV DYNQNARDHT
IAAAYSVRGL PDARVSTPIR WDEVDDADPR DFTIFTVPER FARLGDLHTD IDDGGGRGPF
DIASLLEWAD RDERDGAAGP DDEQSE
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