| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_2443 |
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| Symbol | |
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| ID | 4598279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 2605306 |
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| End bp | 2606724 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639777046 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_923635 |
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| Protein GI | 119716670 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA CCCGGCCTCG GGGCCACCAA CGAGAGCCTC AGCGCGGGTC CCCGGGTGGG
TCCCAGCGCG GCAACCGGCC CCGCGTCGAC CCGGCCCGGC TCGCGGCGCT CGACGTGATG
AAGGCCGTGC GGGTCGACGG CGCCTACACG AATCTCGTCC TGCCGTCGGT GCTGCGCCAG
CACGGGCTCT CCGGCCGGGA CGCCGCGTTC GTGACCGAGC TGGTGTCCGG CACCATCCGC
AGACGTGGGA CGTACGACGC CATCCTGGCC GCCTGCGTCG ACCGGCCCCT GAGCAAGGTG
GAGGCCAAGG TCCTCGACGC GCTGCGGCTC GGCACCCACC AGCTGCTCTC CATGCGGGTC
CCGGTGCACG CGGCGATCAG CACGACGGTC GACCTGGTCC GGGCCAAGGT CAGCTCGGGC
GCGGGTGGCT TCGCGAACGC CGTCCTGCGC CAGGTGGCCC GGCAGGAGCT GACCGAGTGG
ATCGCCCGGG TCGCTCCGGA CCCGCGGGTC GCGCCGACCC GGTTCGCCTC GATCGCCTAC
AGCCATCCAC GCTGGATCGT CGACGAGCTC CGCTCGGCCG TCGGCGCCGA CGAGCTGTTC
GAGCTGCTCG CGGCGGACAA CGAGCCGCCG CGGGTGACGC TCGTGGCTCG CCCCGGGCGG
TCCGGCCGCG AGGAGCTGCC GGGTGAGCCG ACCCCCTACT CGCCGTACGG CGTGGTCCTC
GGCGGGGGCG ACCCGGGTGA GATCCCGGCG GTCGCCGAGG GCCGGGCGGG GGTCCAGGAC
GAGGGCTCGC AGCTGGTCGC TGCGGCGCTC GCGGCCGCAC CGATCGAGGG GCCCGACCGC
CGCTGGCTCG ACCTGTGCGC CGGTCCCGGC GGGAAGTCGG CCTTGCTGGC CGCGCTGGCC
GCCCAGCGGG GCGCCCGCCT GGTGGCCGCC GAGCGCCAGG AGCACCGGAC CCGGCTGGTG
CTGCGCGCGC TGCGCGACGC GCCCGGTGTT GCTGGCATCG TGACGTCCGA CGGCACCGCG
CCGCCGTTCG CCGAGGGCAC CTTCGACCGA GTGCTCGTCG ACGCGCCCTG CACCGGCCTC
GGCGCGCTCC GGCGCCGGCC CGAGGCCCGG TGGCGGCGCC GGGCCGACGA CCTGCTCAGC
CTGGTGCTGC TCCAGCGACG CCTGCTCTCC TCCGCCCTCG ACCTGGTCCG GCCCGGTGGC
GTGGTGGTCT ACGCCACGTG CTCGCCGGTG ATCTCCGAGA CCCGGGGCGT GGTGTCCTCG
GTGCTCGAGA GCCGCGACGA CGCGGAGCCG GGGGACACGC GGTCGTTGCT GCCCGCGATC
CCCGGCTGCG AGGGTCCGAT GCCCGGAACG GTGCAGCTGT GGCCGCACCG GCACGGCACC
GACGCGATGT TCCTCGCGTT ACTGCGGCGC ACCGCCTGA
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| Protein sequence | MSDTRPRGHQ REPQRGSPGG SQRGNRPRVD PARLAALDVM KAVRVDGAYT NLVLPSVLRQ
HGLSGRDAAF VTELVSGTIR RRGTYDAILA ACVDRPLSKV EAKVLDALRL GTHQLLSMRV
PVHAAISTTV DLVRAKVSSG AGGFANAVLR QVARQELTEW IARVAPDPRV APTRFASIAY
SHPRWIVDEL RSAVGADELF ELLAADNEPP RVTLVARPGR SGREELPGEP TPYSPYGVVL
GGGDPGEIPA VAEGRAGVQD EGSQLVAAAL AAAPIEGPDR RWLDLCAGPG GKSALLAALA
AQRGARLVAA ERQEHRTRLV LRALRDAPGV AGIVTSDGTA PPFAEGTFDR VLVDAPCTGL
GALRRRPEAR WRRRADDLLS LVLLQRRLLS SALDLVRPGG VVVYATCSPV ISETRGVVSS
VLESRDDAEP GDTRSLLPAI PGCEGPMPGT VQLWPHRHGT DAMFLALLRR TA
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