Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2413 |
Symbol | aroK |
ID | 4598249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2573458 |
End bp | 2574009 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639777016 |
Product | shikimate kinase |
Protein accession | YP_923605 |
Protein GI | 119716640 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.237491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGAC CCGCACGCCC CCGCGTCGTC CTGGTCGGGC CGATGGGGGC CGGCAAGACC ACCGTCGCCC GGCTGCTGGC CGACGCCTGG GGCACCGGGG TCCGGGACAC GGACCACGAC GTCGAGTCGG CCGAGGGTCG GACCATCTCC GACATCTTCG TGGACTCCGG CGAGGGCGCC TTCCGAGACC TGGAGCGACG AGCGGTCGCG GCCGCGTTGC GCGAGCACGA CGGCGTGCTC GCGCTGGGCG GGGGAGCCGT GCTGGACCCT GGGACCCGCG ACCTGCTGGC CGGCCACCGG GTCGTGTTCC TGCGGGTCGG CCTCTCCGAC GCCGTCAAGC GAGTCGGCCT CGGCGTCGCC CGCCCGCTGC TCCTCGGCAA CGTCCGCGGA CGGATCAAGG CGCTCCTCGA CGAGCGCACC CCCATCTACG AGTCGGTCGC GACCTTGGTC GTGGACACCG ACGGCCGCAG CCCCGAGGAT GTCGCCCAGG AGATCCGCGC TGCACTCGAC GGGCCTGCGC TCGACGGGTC GGCGCTGGAG GGGGAAGCAT GA
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Protein sequence | MTGPARPRVV LVGPMGAGKT TVARLLADAW GTGVRDTDHD VESAEGRTIS DIFVDSGEGA FRDLERRAVA AALREHDGVL ALGGGAVLDP GTRDLLAGHR VVFLRVGLSD AVKRVGLGVA RPLLLGNVRG RIKALLDERT PIYESVATLV VDTDGRSPED VAQEIRAALD GPALDGSALE GEA
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