Gene Noca_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_2413 
SymbolaroK 
ID4598249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp2573458 
End bp2574009 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content74% 
IMG OID639777016 
Productshikimate kinase 
Protein accessionYP_923605 
Protein GI119716640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.237491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGAC CCGCACGCCC CCGCGTCGTC CTGGTCGGGC CGATGGGGGC CGGCAAGACC 
ACCGTCGCCC GGCTGCTGGC CGACGCCTGG GGCACCGGGG TCCGGGACAC GGACCACGAC
GTCGAGTCGG CCGAGGGTCG GACCATCTCC GACATCTTCG TGGACTCCGG CGAGGGCGCC
TTCCGAGACC TGGAGCGACG AGCGGTCGCG GCCGCGTTGC GCGAGCACGA CGGCGTGCTC
GCGCTGGGCG GGGGAGCCGT GCTGGACCCT GGGACCCGCG ACCTGCTGGC CGGCCACCGG
GTCGTGTTCC TGCGGGTCGG CCTCTCCGAC GCCGTCAAGC GAGTCGGCCT CGGCGTCGCC
CGCCCGCTGC TCCTCGGCAA CGTCCGCGGA CGGATCAAGG CGCTCCTCGA CGAGCGCACC
CCCATCTACG AGTCGGTCGC GACCTTGGTC GTGGACACCG ACGGCCGCAG CCCCGAGGAT
GTCGCCCAGG AGATCCGCGC TGCACTCGAC GGGCCTGCGC TCGACGGGTC GGCGCTGGAG
GGGGAAGCAT GA
 
Protein sequence
MTGPARPRVV LVGPMGAGKT TVARLLADAW GTGVRDTDHD VESAEGRTIS DIFVDSGEGA 
FRDLERRAVA AALREHDGVL ALGGGAVLDP GTRDLLAGHR VVFLRVGLSD AVKRVGLGVA
RPLLLGNVRG RIKALLDERT PIYESVATLV VDTDGRSPED VAQEIRAALD GPALDGSALE
GEA