Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_2403 |
Symbol | |
ID | 4599503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 2562780 |
End bp | 2564057 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639777006 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_923595 |
Protein GI | 119716630 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.307995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACC AGCAGCTGCC GACCAGCGTC GGCATGCCGG GCGACGACCC GAAGGGCCGC GGCGAGGACG CGACCACGGA GTCAGCCCAG TACGTCGAGA CCGAGCGTCC GCACGGCGCC TCACGCGCGC ACTTCGACGC CGAGCCGATC CTCGAGGTCC GCGACCTGAA GATGTACTTC CCGGTCCGCT CGGCCGGCAT CATCCGGCGC ACCATCGGCC ACGTGCAGGC GGTGGACGGC GTGTCCTTCC AGGTGCCCAA GGGCGGCTCG CTCGGGCTGG TCGGAGAGTC CGGGTGCGGC AAGTCCACCA CGGGGCGGAT GATCACCCGG CTCTACGAGC CCACCGCGGG CTCGATCGAG TTCGACGGCC GGGACATCGC GAAGACCTCG GCGCGCGGCC TCAAGCCGCT GCGACGTGAG GTCCAGATGA TCTTCCAGGA CCCCTACACG TCGCTGAACC CGCGGCACAC CGTCGGCTCG ATCGTCGGCG CCCCGCTGGC GATCCACAAC GTGCTGCCGA AGAACAAGAT CCTCCCGCGG GTCCAGGAGC TGCTGGAGAT CGTCGGCCTC AACCCCGAGC ACTACAACCG CTACCCGCAC GAGTTCTCCG GCGGCCAGCG CCAGCGCATC GGCATCGCCC GGGCGCTCAC GCTCCACCCG AAGCTGCTGG TGGCCGACGA GCCGGTCTCC GCGCTGGACG TCTCGATCCA GGCACAGGTG ATCAACCTCC TCCAGGAGGT GCAGGACGAG TTCGACATCG CGTTCCTGTT CATCGCCCAC GACCTCGCGG TGGTCCGGCA CTTCTGCCCC GAGGTCGCGG TGATGTACCT CGGCAAGATC GTGGAGATCG CCGACCGGGA CTCGCTCTAC AACCACCCGA ACCACCCCTA CACCCAGGCG CTGCTCTCGG CGGTGCCCGA CGTCAAGCAG GCCGCGATCG GTGGTCGGCG CGAGCGGATC CGGCTGGAGG GCGACGTCCC CAGCCCGATC AACCCACCGT CGGGCTGCCG GTTCCGCACC CGCTGCGCGC TCGCCCAGGA GATCTGCGCC CGGGTCGAGC CGCCGCTGCT GCAGATCGGC AAGCGCCACA AGGTCGCCTG CCACTTCGCG GGCGAGCTGG GCCACCACCC GGACCGGCCG GTGACCGCGC CGCTGCTCGG GGTCGACGAC ACGGGCACGC CCGACCCGGG CGCGAGCCCG AGCATCGAGG TCGGCAACGA TCCCGGGTAC GCCGACACGT GGTTCGACCT CGAGCGCAAG ACGATGGCCT CCGCCTGA
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Protein sequence | MSDQQLPTSV GMPGDDPKGR GEDATTESAQ YVETERPHGA SRAHFDAEPI LEVRDLKMYF PVRSAGIIRR TIGHVQAVDG VSFQVPKGGS LGLVGESGCG KSTTGRMITR LYEPTAGSIE FDGRDIAKTS ARGLKPLRRE VQMIFQDPYT SLNPRHTVGS IVGAPLAIHN VLPKNKILPR VQELLEIVGL NPEHYNRYPH EFSGGQRQRI GIARALTLHP KLLVADEPVS ALDVSIQAQV INLLQEVQDE FDIAFLFIAH DLAVVRHFCP EVAVMYLGKI VEIADRDSLY NHPNHPYTQA LLSAVPDVKQ AAIGGRRERI RLEGDVPSPI NPPSGCRFRT RCALAQEICA RVEPPLLQIG KRHKVACHFA GELGHHPDRP VTAPLLGVDD TGTPDPGASP SIEVGNDPGY ADTWFDLERK TMASA
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